Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC084346.2-201ENST00000607097 949 ntBASIC19.16■□□□□ 0.66
NUP98P52948 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NUP98P52948 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP98P52948 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.16■□□□□ 0.66
NUP98P52948 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.15■□□□□ 0.66
NUP98P52948 AL157414.3-201ENST00000624276 1954 ntBASIC19.15■□□□□ 0.66
NUP98P52948 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC19.15■□□□□ 0.66
NUP98P52948 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.15■□□□□ 0.66
NUP98P52948 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
NUP98P52948 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
NUP98P52948 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.15■□□□□ 0.66
NUP98P52948 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NUP98P52948 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.15■□□□□ 0.66
NUP98P52948 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.15■□□□□ 0.66
NUP98P52948 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.15■□□□□ 0.66
NUP98P52948 TSACC-208ENST00000481479 741 ntTSL 2 BASIC19.15■□□□□ 0.66
NUP98P52948 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.15■□□□□ 0.66
NUP98P52948 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.15■□□□□ 0.66
NUP98P52948 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.15■□□□□ 0.66
NUP98P52948 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.15■□□□□ 0.66
NUP98P52948 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.15■□□□□ 0.66
NUP98P52948 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
NUP98P52948 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
NUP98P52948 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.14■□□□□ 0.65
NUP98P52948 SLC25A24P2-201ENST00000415059 510 ntBASIC19.14■□□□□ 0.65
NUP98P52948 EIF4HP1-201ENST00000453115 687 ntBASIC19.14■□□□□ 0.65
NUP98P52948 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP98P52948 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC19.14■□□□□ 0.65
NUP98P52948 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC19.14■□□□□ 0.65
NUP98P52948 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP98P52948 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.14■□□□□ 0.65
NUP98P52948 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.14■□□□□ 0.65
NUP98P52948 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC19.14■□□□□ 0.65
NUP98P52948 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC19.14■□□□□ 0.65
NUP98P52948 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.14■□□□□ 0.65
NUP98P52948 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.14■□□□□ 0.65
NUP98P52948 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NUP98P52948 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP98P52948 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
NUP98P52948 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NUP98P52948 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
NUP98P52948 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NUP98P52948 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.14■□□□□ 0.65
NUP98P52948 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP98P52948 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP98P52948 AC099398.1-201ENST00000567919 2776 ntBASIC19.14■□□□□ 0.65
NUP98P52948 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NUP98P52948 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP98P52948 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.14■□□□□ 0.65
NUP98P52948 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.14■□□□□ 0.65
NUP98P52948 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
NUP98P52948 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.14■□□□□ 0.65
NUP98P52948 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP98P52948 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NUP98P52948 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
NUP98P52948 AC016700.1-201ENST00000429424 312 ntBASIC19.14■□□□□ 0.65
NUP98P52948 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.14■□□□□ 0.65
NUP98P52948 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.14■□□□□ 0.65
NUP98P52948 MIR4683-201ENST00000579659 81 ntBASIC19.14■□□□□ 0.65
NUP98P52948 AL358472.3-201ENST00000608147 415 ntBASIC19.14■□□□□ 0.65
NUP98P52948 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NUP98P52948 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.13■□□□□ 0.65
NUP98P52948 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.13■□□□□ 0.65
NUP98P52948 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP98P52948 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.13■□□□□ 0.65
NUP98P52948 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.13■□□□□ 0.65
NUP98P52948 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP98P52948 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NUP98P52948 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP98P52948 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NUP98P52948 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NUP98P52948 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
NUP98P52948 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.13■□□□□ 0.65
NUP98P52948 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
NUP98P52948 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.13■□□□□ 0.65
NUP98P52948 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.13■□□□□ 0.65
NUP98P52948 AC005077.2-201ENST00000449786 690 ntBASIC19.13■□□□□ 0.65
NUP98P52948 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.13■□□□□ 0.65
NUP98P52948 MESTP3-201ENST00000503460 968 ntBASIC19.13■□□□□ 0.65
NUP98P52948 RNA5SP423-201ENST00000517127 109 ntBASIC19.13■□□□□ 0.65
NUP98P52948 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
NUP98P52948 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms