Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.5□□□□□ -0.41
CDC34P49427 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
CDC34P49427 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.5□□□□□ -0.41
CDC34P49427 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CDC34P49427 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC12.5□□□□□ -0.41
CDC34P49427 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 AC117489.1-201ENST00000625169 3217 ntBASIC12.5□□□□□ -0.41
CDC34P49427 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CDC34P49427 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
CDC34P49427 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CDC34P49427 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CDC34P49427 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.49□□□□□ -0.41
CDC34P49427 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CDC34P49427 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.49□□□□□ -0.41
CDC34P49427 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.49□□□□□ -0.41
CDC34P49427 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.49□□□□□ -0.41
CDC34P49427 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 AC127383.1-201ENST00000444697 1800 ntBASIC12.49□□□□□ -0.41
CDC34P49427 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.49□□□□□ -0.41
CDC34P49427 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.49□□□□□ -0.41
CDC34P49427 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CDC34P49427 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.49□□□□□ -0.41
CDC34P49427 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.49□□□□□ -0.41
CDC34P49427 MIR3909-201ENST00000579518 119 ntBASIC12.49□□□□□ -0.41
CDC34P49427 MIR4321-201ENST00000592276 80 ntBASIC12.49□□□□□ -0.41
CDC34P49427 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CDC34P49427 AC069148.1-201ENST00000608741 768 ntBASIC12.49□□□□□ -0.41
CDC34P49427 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CDC34P49427 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.49□□□□□ -0.41
CDC34P49427 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.49□□□□□ -0.41
CDC34P49427 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CDC34P49427 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.49□□□□□ -0.41
CDC34P49427 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.49□□□□□ -0.41
CDC34P49427 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.49□□□□□ -0.41
CDC34P49427 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CDC34P49427 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.49□□□□□ -0.41
CDC34P49427 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CDC34P49427 ZBED1P1-201ENST00000502364 1930 ntBASIC12.49□□□□□ -0.41
CDC34P49427 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CDC34P49427 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.48□□□□□ -0.41
CDC34P49427 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.48□□□□□ -0.41
CDC34P49427 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC12.48□□□□□ -0.41
CDC34P49427 AC079781.5-202ENST00000641784 3743 ntBASIC12.48□□□□□ -0.41
CDC34P49427 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CDC34P49427 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 AC005840.4-201ENST00000541242 2494 ntBASIC12.48□□□□□ -0.41
CDC34P49427 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.48□□□□□ -0.41
CDC34P49427 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CDC34P49427 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.48□□□□□ -0.41
CDC34P49427 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.48□□□□□ -0.41
CDC34P49427 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CDC34P49427 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms