Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 BNIP3P1-202ENST00000550043 1585 ntBASIC13.92□□□□□ -0.18
SOX2P48431 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SOX2P48431 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 BCAR1-209ENST00000546196 1340 ntBASIC13.91□□□□□ -0.18
SOX2P48431 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 AC026748.1-201ENST00000624349 3251 ntBASIC13.91□□□□□ -0.18
SOX2P48431 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SOX2P48431 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.91□□□□□ -0.18
SOX2P48431 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
SOX2P48431 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
SOX2P48431 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX2P48431 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.91□□□□□ -0.18
SOX2P48431 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX2P48431 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SOX2P48431 RNA5SP415-201ENST00000517246 115 ntBASIC13.91□□□□□ -0.18
SOX2P48431 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SOX2P48431 MIR4313-201ENST00000580760 101 ntBASIC13.91□□□□□ -0.18
SOX2P48431 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.91□□□□□ -0.18
SOX2P48431 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SOX2P48431 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SOX2P48431 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.91□□□□□ -0.18
SOX2P48431 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.91□□□□□ -0.18
SOX2P48431 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
SOX2P48431 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.91□□□□□ -0.18
SOX2P48431 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SOX2P48431 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SOX2P48431 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX2P48431 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX2P48431 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SOX2P48431 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SOX2P48431 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SOX2P48431 REXO1L1P-202ENST00000608646 1974 ntBASIC13.91□□□□□ -0.18
SOX2P48431 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
SOX2P48431 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
SOX2P48431 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SOX2P48431 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.91□□□□□ -0.18
SOX2P48431 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.9□□□□□ -0.18
SOX2P48431 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SOX2P48431 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.9□□□□□ -0.18
SOX2P48431 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SOX2P48431 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.9□□□□□ -0.18
SOX2P48431 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.9□□□□□ -0.18
SOX2P48431 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.9□□□□□ -0.18
SOX2P48431 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.9□□□□□ -0.18
SOX2P48431 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.9□□□□□ -0.18
SOX2P48431 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SOX2P48431 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.9□□□□□ -0.18
SOX2P48431 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.9□□□□□ -0.18
SOX2P48431 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SOX2P48431 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SOX2P48431 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 KRT8P44-201ENST00000441609 1350 ntBASIC13.9□□□□□ -0.18
SOX2P48431 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.9□□□□□ -0.18
SOX2P48431 LINC01101-201ENST00000622953 1884 ntBASIC13.9□□□□□ -0.18
SOX2P48431 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.9□□□□□ -0.18
SOX2P48431 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.9□□□□□ -0.18
SOX2P48431 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
SOX2P48431 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 AC139749.1-202ENST00000617529 3139 ntBASIC13.9□□□□□ -0.18
SOX2P48431 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.9□□□□□ -0.18
SOX2P48431 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SOX2P48431 AL691432.1-201ENST00000596308 1422 ntBASIC13.9□□□□□ -0.19
SOX2P48431 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
SOX2P48431 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms