Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL008721.1-201ENST00000609964 604 ntBASIC14.45□□□□□ -0.1
RFC3P40938 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RFC3P40938 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.45□□□□□ -0.1
RFC3P40938 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
RFC3P40938 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RFC3P40938 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RFC3P40938 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RFC3P40938 Z97205.2-201ENST00000564697 1639 ntBASIC14.44□□□□□ -0.1
RFC3P40938 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
RFC3P40938 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.44□□□□□ -0.1
RFC3P40938 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.44□□□□□ -0.1
RFC3P40938 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.44□□□□□ -0.1
RFC3P40938 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 KRT18P64-201ENST00000434946 1219 ntBASIC14.44□□□□□ -0.1
RFC3P40938 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.44□□□□□ -0.1
RFC3P40938 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.44□□□□□ -0.1
RFC3P40938 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.44□□□□□ -0.1
RFC3P40938 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RFC3P40938 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.44□□□□□ -0.1
RFC3P40938 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.44□□□□□ -0.1
RFC3P40938 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.44□□□□□ -0.1
RFC3P40938 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.44□□□□□ -0.1
RFC3P40938 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
RFC3P40938 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.44□□□□□ -0.1
RFC3P40938 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RFC3P40938 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.44□□□□□ -0.1
RFC3P40938 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RFC3P40938 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
RFC3P40938 CDC14C-201ENST00000428251 1719 ntBASIC14.44□□□□□ -0.1
RFC3P40938 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
RFC3P40938 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.43□□□□□ -0.1
RFC3P40938 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.43□□□□□ -0.1
RFC3P40938 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 AC024909.3-201ENST00000611513 2257 ntBASIC14.43□□□□□ -0.1
RFC3P40938 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
RFC3P40938 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.43□□□□□ -0.1
RFC3P40938 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
RFC3P40938 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.43□□□□□ -0.1
RFC3P40938 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
RFC3P40938 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.43□□□□□ -0.1
RFC3P40938 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
RFC3P40938 U91328.1-201ENST00000437528 223 ntBASIC14.43□□□□□ -0.1
RFC3P40938 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 EEF1DP4-201ENST00000446006 880 ntBASIC14.43□□□□□ -0.1
RFC3P40938 RN7SL837P-201ENST00000463010 287 ntBASIC14.43□□□□□ -0.1
RFC3P40938 AC011495.1-201ENST00000498085 584 ntBASIC14.43□□□□□ -0.1
RFC3P40938 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.43□□□□□ -0.1
RFC3P40938 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.43□□□□□ -0.1
RFC3P40938 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.43□□□□□ -0.1
RFC3P40938 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.43□□□□□ -0.1
RFC3P40938 HILS1-202ENST00000545329 423 ntBASIC14.43□□□□□ -0.1
RFC3P40938 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RFC3P40938 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.43□□□□□ -0.1
RFC3P40938 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RFC3P40938 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RFC3P40938 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.43□□□□□ -0.1
RFC3P40938 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.43□□□□□ -0.1
RFC3P40938 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms