Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
RFC4P35249 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
RFC4P35249 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.52■□□□□ 0.72
RFC4P35249 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RFC4P35249 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 Z97180.1-201ENST00000445173 988 ntBASIC19.52■□□□□ 0.72
RFC4P35249 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.52■□□□□ 0.72
RFC4P35249 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.52■□□□□ 0.72
RFC4P35249 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RFC4P35249 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.52■□□□□ 0.72
RFC4P35249 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RFC4P35249 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.52■□□□□ 0.71
RFC4P35249 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
RFC4P35249 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
RFC4P35249 AC012313.1-201ENST00000593393 3059 ntBASIC19.52■□□□□ 0.71
RFC4P35249 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
RFC4P35249 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
RFC4P35249 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
RFC4P35249 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RFC4P35249 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.51■□□□□ 0.71
RFC4P35249 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RFC4P35249 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.51■□□□□ 0.71
RFC4P35249 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.51■□□□□ 0.71
RFC4P35249 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.51■□□□□ 0.71
RFC4P35249 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC19.51■□□□□ 0.71
RFC4P35249 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.51■□□□□ 0.71
RFC4P35249 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.51■□□□□ 0.71
RFC4P35249 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC19.51■□□□□ 0.71
RFC4P35249 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RFC4P35249 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC19.51■□□□□ 0.71
RFC4P35249 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.51■□□□□ 0.71
RFC4P35249 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC19.51■□□□□ 0.71
RFC4P35249 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
RFC4P35249 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RFC4P35249 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RFC4P35249 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
RFC4P35249 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RFC4P35249 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
RFC4P35249 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RFC4P35249 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.51■□□□□ 0.71
RFC4P35249 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RFC4P35249 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC4P35249 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFC4P35249 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC4P35249 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RFC4P35249 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RFC4P35249 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.5■□□□□ 0.71
RFC4P35249 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFC4P35249 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC4P35249 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC4P35249 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFC4P35249 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC4P35249 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC4P35249 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC4P35249 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC4P35249 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.5■□□□□ 0.71
RFC4P35249 AL139094.1-201ENST00000405549 1188 ntBASIC19.5■□□□□ 0.71
RFC4P35249 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RFC4P35249 AL008707.1-201ENST00000422498 534 ntBASIC19.5■□□□□ 0.71
RFC4P35249 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC19.5■□□□□ 0.71
RFC4P35249 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
RFC4P35249 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC4P35249 AC253536.4-201ENST00000440539 267 ntBASIC19.5■□□□□ 0.71
RFC4P35249 MAGEA5-201ENST00000446757 942 ntBASIC19.5■□□□□ 0.71
RFC4P35249 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC19.5■□□□□ 0.71
RFC4P35249 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.5■□□□□ 0.71
RFC4P35249 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC19.5■□□□□ 0.71
RFC4P35249 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.5■□□□□ 0.71
RFC4P35249 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.5■□□□□ 0.71
RFC4P35249 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC19.5■□□□□ 0.71
RFC4P35249 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.5■□□□□ 0.71
RFC4P35249 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RFC4P35249 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.5■□□□□ 0.71
RFC4P35249 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RFC4P35249 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.5■□□□□ 0.71
RFC4P35249 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.5■□□□□ 0.71
RFC4P35249 TUBBP5-203ENST00000508529 1334 ntBASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms