Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.02□□□□□ -0.17
CD40LGP29965 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CD40LGP29965 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CD40LGP29965 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.01□□□□□ -0.17
CD40LGP29965 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.01□□□□□ -0.17
CD40LGP29965 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CD40LGP29965 WASH6P-202ENST00000359512 1437 ntBASIC14.01□□□□□ -0.17
CD40LGP29965 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CD40LGP29965 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.01□□□□□ -0.17
CD40LGP29965 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CD40LGP29965 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 AC016734.2-201ENST00000624325 1377 ntBASIC14.01□□□□□ -0.17
CD40LGP29965 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CD40LGP29965 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CD40LGP29965 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CD40LGP29965 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.01□□□□□ -0.17
CD40LGP29965 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.01□□□□□ -0.17
CD40LGP29965 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.01□□□□□ -0.17
CD40LGP29965 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.01□□□□□ -0.17
CD40LGP29965 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.01□□□□□ -0.17
CD40LGP29965 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.01□□□□□ -0.17
CD40LGP29965 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.01□□□□□ -0.17
CD40LGP29965 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 AC091167.2-201ENST00000579581 588 ntBASIC14.01□□□□□ -0.17
CD40LGP29965 AC092329.2-201ENST00000598402 547 ntBASIC14.01□□□□□ -0.17
CD40LGP29965 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CD40LGP29965 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.01□□□□□ -0.17
CD40LGP29965 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 AC152010.1-201ENST00000415779 2006 ntBASIC14.01□□□□□ -0.17
CD40LGP29965 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.01□□□□□ -0.17
CD40LGP29965 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
CD40LGP29965 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.01□□□□□ -0.17
CD40LGP29965 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CD40LGP29965 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.01□□□□□ -0.17
CD40LGP29965 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CD40LGP29965 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CD40LGP29965 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CD40LGP29965 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.01□□□□□ -0.17
CD40LGP29965 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CD40LGP29965 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CD40LGP29965 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14□□□□□ -0.17
CD40LGP29965 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD40LGP29965 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14□□□□□ -0.17
CD40LGP29965 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14□□□□□ -0.17
CD40LGP29965 Z82170.1-201ENST00000625081 3192 ntBASIC14□□□□□ -0.17
CD40LGP29965 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14□□□□□ -0.17
CD40LGP29965 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14□□□□□ -0.17
CD40LGP29965 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD40LGP29965 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CD40LGP29965 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14□□□□□ -0.17
CD40LGP29965 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD40LGP29965 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD40LGP29965 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD40LGP29965 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CD40LGP29965 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD40LGP29965 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14□□□□□ -0.17
CD40LGP29965 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14□□□□□ -0.17
CD40LGP29965 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14□□□□□ -0.17
CD40LGP29965 MINOS1P3-201ENST00000457048 203 ntBASIC14□□□□□ -0.17
CD40LGP29965 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14□□□□□ -0.17
CD40LGP29965 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14□□□□□ -0.17
CD40LGP29965 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD40LGP29965 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CD40LGP29965 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14□□□□□ -0.17
CD40LGP29965 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CD40LGP29965 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14□□□□□ -0.17
CD40LGP29965 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14□□□□□ -0.17
CD40LGP29965 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CD40LGP29965 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CD40LGP29965 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CD40LGP29965 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CD40LGP29965 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
CD40LGP29965 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms