Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40P25942 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.53□□□□□ -0.24
CD40P25942 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.53□□□□□ -0.24
CD40P25942 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.53□□□□□ -0.24
CD40P25942 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
CD40P25942 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CD40P25942 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.53□□□□□ -0.24
CD40P25942 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.53□□□□□ -0.24
CD40P25942 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CD40P25942 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.53□□□□□ -0.24
CD40P25942 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
CD40P25942 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD40P25942 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD40P25942 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD40P25942 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD40P25942 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD40P25942 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.52□□□□□ -0.24
CD40P25942 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CD40P25942 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CD40P25942 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.52□□□□□ -0.24
CD40P25942 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
CD40P25942 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.52□□□□□ -0.24
CD40P25942 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD40P25942 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.24
CD40P25942 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD40P25942 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CD40P25942 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
CD40P25942 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CD40P25942 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 AP003680.1-201ENST00000598970 3660 ntBASIC13.52□□□□□ -0.25
CD40P25942 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
CD40P25942 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
CD40P25942 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.52□□□□□ -0.25
CD40P25942 C1QBPP1-201ENST00000400117 770 ntBASIC13.52□□□□□ -0.25
CD40P25942 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.52□□□□□ -0.25
CD40P25942 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.52□□□□□ -0.25
CD40P25942 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.52□□□□□ -0.25
CD40P25942 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.52□□□□□ -0.25
CD40P25942 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.52□□□□□ -0.25
CD40P25942 ENPP7P5-201ENST00000541031 1031 ntBASIC13.52□□□□□ -0.25
CD40P25942 AC120045.2-201ENST00000567334 178 ntBASIC13.52□□□□□ -0.25
CD40P25942 AC106886.1-201ENST00000568660 600 ntBASIC13.52□□□□□ -0.25
CD40P25942 AC015910.1-201ENST00000579400 975 ntBASIC13.52□□□□□ -0.25
CD40P25942 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CD40P25942 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.52□□□□□ -0.25
CD40P25942 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.52□□□□□ -0.25
CD40P25942 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.52□□□□□ -0.25
CD40P25942 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.52□□□□□ -0.25
CD40P25942 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.52□□□□□ -0.25
CD40P25942 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.52□□□□□ -0.25
CD40P25942 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CD40P25942 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.52□□□□□ -0.25
CD40P25942 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD40P25942 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CD40P25942 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.51□□□□□ -0.25
CD40P25942 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
CD40P25942 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
CD40P25942 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CD40P25942 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CD40P25942 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CD40P25942 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.51□□□□□ -0.25
CD40P25942 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
CD40P25942 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms