Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP24386 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP24386 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.77□□□□□ -0.05
CHMP24386 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP24386 AC018529.1-201ENST00000613063 361 ntBASIC14.77□□□□□ -0.05
CHMP24386 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP24386 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP24386 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CHMP24386 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.77□□□□□ -0.05
CHMP24386 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP24386 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.77□□□□□ -0.05
CHMP24386 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP24386 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.77□□□□□ -0.05
CHMP24386 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP24386 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP24386 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
CHMP24386 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP24386 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHMP24386 AL589702.1-201ENST00000641229 1509 ntBASIC14.76□□□□□ -0.05
CHMP24386 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP24386 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CHMP24386 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.76□□□□□ -0.05
CHMP24386 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CHMP24386 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.76□□□□□ -0.05
CHMP24386 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CHMP24386 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP24386 TUBB3P1-201ENST00000405796 1332 ntBASIC14.76□□□□□ -0.05
CHMP24386 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP24386 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CHMP24386 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.76□□□□□ -0.05
CHMP24386 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.76□□□□□ -0.05
CHMP24386 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.76□□□□□ -0.05
CHMP24386 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP24386 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 MIR6080-201ENST00000617359 66 ntBASIC14.76□□□□□ -0.05
CHMP24386 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 AC105250.1-201ENST00000509378 2057 ntBASIC14.76□□□□□ -0.05
CHMP24386 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP24386 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CHMP24386 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.76□□□□□ -0.05
CHMP24386 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CHMP24386 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.76□□□□□ -0.05
CHMP24386 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.76□□□□□ -0.05
CHMP24386 AC090616.6-203ENST00000579186 1945 ntBASIC14.76□□□□□ -0.05
CHMP24386 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP24386 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.76□□□□□ -0.05
CHMP24386 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CHMP24386 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
CHMP24386 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CHMP24386 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.75□□□□□ -0.05
CHMP24386 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.75□□□□□ -0.05
CHMP24386 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 CICP24-201ENST00000605464 2705 ntBASIC14.75□□□□□ -0.05
CHMP24386 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.75□□□□□ -0.05
CHMP24386 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CHMP24386 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CHMP24386 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CHMP24386 MIR770-201ENST00000390219 98 ntBASIC14.75□□□□□ -0.05
CHMP24386 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.75□□□□□ -0.05
CHMP24386 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.75□□□□□ -0.05
CHMP24386 RNA5SP410-201ENST00000516285 106 ntBASIC14.75□□□□□ -0.05
CHMP24386 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.75□□□□□ -0.05
CHMP24386 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.75□□□□□ -0.05
CHMP24386 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.75□□□□□ -0.05
CHMP24386 AC051619.7-201ENST00000568314 623 ntBASIC14.75□□□□□ -0.05
CHMP24386 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.75□□□□□ -0.05
CHMP24386 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.75□□□□□ -0.05
CHMP24386 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms