Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP8P22894 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP8P22894 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
MMP8P22894 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP8P22894 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 AC114501.2-201ENST00000439631 535 ntBASIC16.5■□□□□ 0.23
MMP8P22894 AC092183.1-201ENST00000469884 875 ntBASIC16.5■□□□□ 0.23
MMP8P22894 IGHV3-42-201ENST00000520410 361 ntBASIC16.5■□□□□ 0.23
MMP8P22894 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP8P22894 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MMP8P22894 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.5■□□□□ 0.23
MMP8P22894 AL390955.2-201ENST00000603032 514 ntBASIC16.5■□□□□ 0.23
MMP8P22894 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.5■□□□□ 0.23
MMP8P22894 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.5■□□□□ 0.23
MMP8P22894 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MMP8P22894 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.5■□□□□ 0.23
MMP8P22894 AC148477.4-201ENST00000613430 1793 ntBASIC16.5■□□□□ 0.23
MMP8P22894 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.5■□□□□ 0.23
MMP8P22894 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP8P22894 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.5■□□□□ 0.23
MMP8P22894 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MMP8P22894 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 AC103702.1-201ENST00000548801 2630 ntBASIC16.49■□□□□ 0.23
MMP8P22894 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MMP8P22894 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP8P22894 AC023024.2-201ENST00000623561 1993 ntBASIC16.49■□□□□ 0.23
MMP8P22894 BTBD7P1-201ENST00000447253 1453 ntBASIC16.49■□□□□ 0.23
MMP8P22894 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MMP8P22894 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MMP8P22894 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP8P22894 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP8P22894 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP8P22894 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP8P22894 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MMP8P22894 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.49■□□□□ 0.23
MMP8P22894 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP8P22894 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.49■□□□□ 0.23
MMP8P22894 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.49■□□□□ 0.23
MMP8P22894 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.49■□□□□ 0.23
MMP8P22894 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.49■□□□□ 0.23
MMP8P22894 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
MMP8P22894 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 AC092337.1-201ENST00000568699 1129 ntBASIC16.49■□□□□ 0.23
MMP8P22894 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.49■□□□□ 0.23
MMP8P22894 AC093512.1-201ENST00000617969 520 ntBASIC16.49■□□□□ 0.23
MMP8P22894 AL390754.1-201ENST00000619088 582 ntBASIC16.49■□□□□ 0.23
MMP8P22894 AC004461.2-201ENST00000629517 803 ntBASIC16.49■□□□□ 0.23
MMP8P22894 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP8P22894 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP8P22894 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.49■□□□□ 0.23
MMP8P22894 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MMP8P22894 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.48■□□□□ 0.23
MMP8P22894 AC138969.3-201ENST00000546612 1459 ntBASIC16.48■□□□□ 0.23
MMP8P22894 AC138932.2-201ENST00000548268 1459 ntBASIC16.48■□□□□ 0.23
MMP8P22894 AC126755.4-201ENST00000549796 1459 ntBASIC16.48■□□□□ 0.23
MMP8P22894 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP8P22894 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms