Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS1P17812 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS1P17812 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.81■□□□□ 0.12
CTPS1P17812 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS1P17812 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS1P17812 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS1P17812 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS1P17812 TPRX2P-201ENST00000535362 881 ntBASIC15.81■□□□□ 0.12
CTPS1P17812 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.81■□□□□ 0.12
CTPS1P17812 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.81■□□□□ 0.12
CTPS1P17812 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS1P17812 AC092337.1-201ENST00000568699 1129 ntBASIC15.81■□□□□ 0.12
CTPS1P17812 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.81■□□□□ 0.12
CTPS1P17812 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CTPS1P17812 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS1P17812 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS1P17812 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.81■□□□□ 0.12
CTPS1P17812 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTPS1P17812 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CTPS1P17812 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.8■□□□□ 0.12
CTPS1P17812 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.8■□□□□ 0.12
CTPS1P17812 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CTPS1P17812 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.8■□□□□ 0.12
CTPS1P17812 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CTPS1P17812 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.8■□□□□ 0.12
CTPS1P17812 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.8■□□□□ 0.12
CTPS1P17812 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 AC007541.1-201ENST00000570282 1469 ntBASIC15.8■□□□□ 0.12
CTPS1P17812 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CTPS1P17812 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CTPS1P17812 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CTPS1P17812 MEIS3P1-201ENST00000495167 958 ntBASIC15.8■□□□□ 0.12
CTPS1P17812 TERF1P3-201ENST00000505638 1227 ntBASIC15.8■□□□□ 0.12
CTPS1P17812 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.8■□□□□ 0.12
CTPS1P17812 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
CTPS1P17812 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.8■□□□□ 0.12
CTPS1P17812 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.8■□□□□ 0.12
CTPS1P17812 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CTPS1P17812 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CTPS1P17812 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.8■□□□□ 0.12
CTPS1P17812 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.8■□□□□ 0.12
CTPS1P17812 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.8■□□□□ 0.12
CTPS1P17812 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CTPS1P17812 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CTPS1P17812 AC127383.1-201ENST00000444697 1800 ntBASIC15.8■□□□□ 0.12
CTPS1P17812 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CTPS1P17812 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTPS1P17812 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.79■□□□□ 0.12
CTPS1P17812 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.79■□□□□ 0.12
CTPS1P17812 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.79■□□□□ 0.12
CTPS1P17812 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.79■□□□□ 0.12
CTPS1P17812 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.79■□□□□ 0.12
CTPS1P17812 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.79■□□□□ 0.12
CTPS1P17812 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.79■□□□□ 0.12
CTPS1P17812 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.79■□□□□ 0.12
CTPS1P17812 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.79■□□□□ 0.12
CTPS1P17812 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CTPS1P17812 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.79■□□□□ 0.12
CTPS1P17812 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.79■□□□□ 0.12
CTPS1P17812 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.79■□□□□ 0.12
CTPS1P17812 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.79■□□□□ 0.12
CTPS1P17812 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.79■□□□□ 0.12
CTPS1P17812 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.79■□□□□ 0.12
CTPS1P17812 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.79■□□□□ 0.12
CTPS1P17812 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.79■□□□□ 0.12
CTPS1P17812 AC138761.1-201ENST00000584393 385 ntBASIC15.79■□□□□ 0.12
CTPS1P17812 AL132655.2-201ENST00000596276 594 ntBASIC15.79■□□□□ 0.12
CTPS1P17812 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CTPS1P17812 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.79■□□□□ 0.12
CTPS1P17812 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTPS1P17812 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms