Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1DP16402 AL136982.4-201ENST00000437689 1740 ntBASIC13.39□□□□□ -0.27
HIST1H1DP16402 FOXO1B-201ENST00000504678 1527 ntBASIC13.39□□□□□ -0.27
HIST1H1DP16402 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H1DP16402 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 AC002056.1-201ENST00000395613 760 ntBASIC13.38□□□□□ -0.27
HIST1H1DP16402 MIR1224-201ENST00000408193 85 ntBASIC13.38□□□□□ -0.27
HIST1H1DP16402 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 AC079781.3-201ENST00000449110 356 ntBASIC13.38□□□□□ -0.27
HIST1H1DP16402 AC093909.1-201ENST00000504731 1122 ntBASIC13.38□□□□□ -0.27
HIST1H1DP16402 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 IGHV3-22-201ENST00000520721 359 ntBASIC13.38□□□□□ -0.27
HIST1H1DP16402 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 KRT8P37-201ENST00000451609 1420 ntBASIC13.38□□□□□ -0.27
HIST1H1DP16402 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HIST1H1DP16402 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1DP16402 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 EEF1DP4-201ENST00000446006 880 ntBASIC13.37□□□□□ -0.27
HIST1H1DP16402 PHKG1P2-201ENST00000457537 863 ntBASIC13.37□□□□□ -0.27
HIST1H1DP16402 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 AL031008.1-201ENST00000619963 541 ntBASIC13.37□□□□□ -0.27
HIST1H1DP16402 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.37□□□□□ -0.27
HIST1H1DP16402 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HIST1H1DP16402 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms