Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.47■□□□□ 0.55
TOP1P11387 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.47■□□□□ 0.55
TOP1P11387 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.47■□□□□ 0.55
TOP1P11387 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.47■□□□□ 0.55
TOP1P11387 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.47■□□□□ 0.55
TOP1P11387 AC005225.4-201ENST00000557330 545 ntBASIC18.47■□□□□ 0.55
TOP1P11387 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC18.47■□□□□ 0.55
TOP1P11387 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.47■□□□□ 0.55
TOP1P11387 AC008494.3-201ENST00000606615 944 ntBASIC18.47■□□□□ 0.55
TOP1P11387 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.47■□□□□ 0.55
TOP1P11387 AL158212.4-201ENST00000624062 1286 ntBASIC18.47■□□□□ 0.55
TOP1P11387 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.47■□□□□ 0.55
TOP1P11387 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TOP1P11387 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TOP1P11387 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC18.47■□□□□ 0.55
TOP1P11387 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.47■□□□□ 0.55
TOP1P11387 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TOP1P11387 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TOP1P11387 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.47■□□□□ 0.55
TOP1P11387 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TOP1P11387 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TOP1P11387 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP1P11387 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP1P11387 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.46■□□□□ 0.55
TOP1P11387 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TOP1P11387 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TOP1P11387 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP1P11387 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TOP1P11387 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.46■□□□□ 0.55
TOP1P11387 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.46■□□□□ 0.55
TOP1P11387 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.46■□□□□ 0.55
TOP1P11387 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.46■□□□□ 0.55
TOP1P11387 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TOP1P11387 RN7SL692P-201ENST00000464677 288 ntBASIC18.46■□□□□ 0.55
TOP1P11387 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.46■□□□□ 0.55
TOP1P11387 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TOP1P11387 AL596325.1-201ENST00000563991 1082 ntBASIC18.46■□□□□ 0.55
TOP1P11387 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.46■□□□□ 0.55
TOP1P11387 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.46■□□□□ 0.55
TOP1P11387 AC007431.3-201ENST00000623221 587 ntBASIC18.46■□□□□ 0.55
TOP1P11387 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.46■□□□□ 0.55
TOP1P11387 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP1P11387 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.46■□□□□ 0.55
TOP1P11387 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP1P11387 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP1P11387 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP1P11387 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.46■□□□□ 0.55
TOP1P11387 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP1P11387 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
TOP1P11387 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TOP1P11387 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TOP1P11387 AC138969.3-201ENST00000546612 1459 ntBASIC18.46■□□□□ 0.54
TOP1P11387 AC138932.2-201ENST00000548268 1459 ntBASIC18.46■□□□□ 0.54
TOP1P11387 AC126755.4-201ENST00000549796 1459 ntBASIC18.46■□□□□ 0.54
TOP1P11387 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.46■□□□□ 0.54
TOP1P11387 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.45■□□□□ 0.54
TOP1P11387 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TOP1P11387 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.45■□□□□ 0.54
TOP1P11387 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TOP1P11387 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TOP1P11387 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TOP1P11387 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.45■□□□□ 0.54
TOP1P11387 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.45■□□□□ 0.54
TOP1P11387 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.45■□□□□ 0.54
TOP1P11387 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TOP1P11387 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.45■□□□□ 0.54
TOP1P11387 DGCR5-201ENST00000399539 862 ntBASIC18.45■□□□□ 0.54
TOP1P11387 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TOP1P11387 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.45■□□□□ 0.54
TOP1P11387 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TOP1P11387 AC123567.1-201ENST00000548294 1261 ntBASIC18.45■□□□□ 0.54
TOP1P11387 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
TOP1P11387 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.45■□□□□ 0.54
TOP1P11387 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.45■□□□□ 0.54
TOP1P11387 AC093726.1-201ENST00000608064 963 ntBASIC18.45■□□□□ 0.54
TOP1P11387 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.45■□□□□ 0.54
TOP1P11387 AC012645.4-201ENST00000610691 1061 ntBASIC18.45■□□□□ 0.54
TOP1P11387 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TOP1P11387 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TOP1P11387 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TOP1P11387 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TOP1P11387 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TOP1P11387 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TOP1P11387 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TOP1P11387 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TOP1P11387 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.45■□□□□ 0.54
TOP1P11387 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TOP1P11387 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
TOP1P11387 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TOP1P11387 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TOP1P11387 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TOP1P11387 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TOP1P11387 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TOP1P11387 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms