Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RARBP10826 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RARBP10826 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.53■□□□□ 0.4
RARBP10826 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RARBP10826 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RARBP10826 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RARBP10826 FLJ38576-201ENST00000623820 2459 ntBASIC17.53■□□□□ 0.4
RARBP10826 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RARBP10826 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.52■□□□□ 0.4
RARBP10826 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RARBP10826 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.52■□□□□ 0.4
RARBP10826 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.52■□□□□ 0.4
RARBP10826 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.52■□□□□ 0.4
RARBP10826 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARBP10826 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARBP10826 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.52■□□□□ 0.4
RARBP10826 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.52■□□□□ 0.4
RARBP10826 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARBP10826 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.52■□□□□ 0.4
RARBP10826 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARBP10826 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARBP10826 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
RARBP10826 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RARBP10826 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.52■□□□□ 0.4
RARBP10826 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RARBP10826 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARBP10826 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.52■□□□□ 0.4
RARBP10826 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RARBP10826 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RARBP10826 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.52■□□□□ 0.4
RARBP10826 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.52■□□□□ 0.4
RARBP10826 AC007969.1-201ENST00000433675 447 ntBASIC17.52■□□□□ 0.4
RARBP10826 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.52■□□□□ 0.4
RARBP10826 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RARBP10826 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.52■□□□□ 0.4
RARBP10826 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.52■□□□□ 0.4
RARBP10826 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC17.52■□□□□ 0.4
RARBP10826 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.52■□□□□ 0.4
RARBP10826 MIR4741-201ENST00000579822 90 ntBASIC17.52■□□□□ 0.4
RARBP10826 AL008638.5-201ENST00000623814 1298 ntBASIC17.52■□□□□ 0.4
RARBP10826 AC132938.4-201ENST00000623835 848 ntBASIC17.52■□□□□ 0.4
RARBP10826 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARBP10826 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RARBP10826 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RARBP10826 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.52■□□□□ 0.39
RARBP10826 AC011270.2-201ENST00000624293 2550 ntBASIC17.52■□□□□ 0.39
RARBP10826 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
RARBP10826 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RARBP10826 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.52■□□□□ 0.39
RARBP10826 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RARBP10826 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RARBP10826 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RARBP10826 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.39
RARBP10826 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RARBP10826 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RARBP10826 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RARBP10826 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
RARBP10826 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RARBP10826 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.52■□□□□ 0.39
RARBP10826 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RARBP10826 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.51■□□□□ 0.39
RARBP10826 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RARBP10826 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.51■□□□□ 0.39
RARBP10826 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 KRT8P35-201ENST00000483942 1338 ntBASIC17.51■□□□□ 0.39
RARBP10826 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.51■□□□□ 0.39
RARBP10826 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.51■□□□□ 0.39
RARBP10826 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.51■□□□□ 0.39
RARBP10826 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
RARBP10826 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.51■□□□□ 0.39
RARBP10826 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.51■□□□□ 0.39
RARBP10826 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RARBP10826 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.51■□□□□ 0.39
RARBP10826 AL591846.1-201ENST00000451736 433 ntBASIC17.51■□□□□ 0.39
RARBP10826 IGHJ2P-201ENST00000454480 60 ntBASIC17.51■□□□□ 0.39
RARBP10826 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.51■□□□□ 0.39
RARBP10826 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.51■□□□□ 0.39
RARBP10826 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.51■□□□□ 0.39
RARBP10826 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.51■□□□□ 0.39
RARBP10826 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.51■□□□□ 0.39
RARBP10826 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.51■□□□□ 0.39
RARBP10826 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 PCDHA14-201ENST00000506751 2298 ntBASIC17.51■□□□□ 0.39
RARBP10826 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RARBP10826 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RARBP10826 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms