Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 REXO1L6P-201ENST00000603433 1515 ntBASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 AC092933.1-201ENST00000393644 945 ntBASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 AC007551.1-201ENST00000457394 519 ntBASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 AC093813.1-201ENST00000605066 256 ntBASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 AC084018.2-201ENST00000613093 2607 ntBASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
IGHV4-38-2P0DP08 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 AC099336.1-201ENST00000417053 1171 ntBASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 AC244669.2-201ENST00000612320 853 ntBASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 AC024909.3-201ENST00000611513 2257 ntBASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
IGHV4-38-2P0DP08 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms