Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.26□□□□□ -0.13
FREM3P0C091 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.26□□□□□ -0.13
FREM3P0C091 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.26□□□□□ -0.13
FREM3P0C091 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.26□□□□□ -0.13
FREM3P0C091 MIR4313-201ENST00000580760 101 ntBASIC14.26□□□□□ -0.13
FREM3P0C091 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.26□□□□□ -0.13
FREM3P0C091 WFDC1-204ENST00000613603 549 ntBASIC14.26□□□□□ -0.13
FREM3P0C091 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.26□□□□□ -0.13
FREM3P0C091 AC126177.1-201ENST00000547829 2218 ntBASIC14.26□□□□□ -0.13
FREM3P0C091 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
FREM3P0C091 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.26□□□□□ -0.13
FREM3P0C091 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
FREM3P0C091 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.26□□□□□ -0.13
FREM3P0C091 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.26□□□□□ -0.13
FREM3P0C091 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
FREM3P0C091 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.26□□□□□ -0.13
FREM3P0C091 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.26□□□□□ -0.13
FREM3P0C091 DOC2GP-202ENST00000514950 1163 ntBASIC14.26□□□□□ -0.13
FREM3P0C091 CTBP2P3-201ENST00000585629 1255 ntBASIC14.26□□□□□ -0.13
FREM3P0C091 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.26□□□□□ -0.13
FREM3P0C091 AL607033.1-201ENST00000623900 1599 ntBASIC14.26□□□□□ -0.13
FREM3P0C091 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
FREM3P0C091 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
FREM3P0C091 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
FREM3P0C091 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
FREM3P0C091 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.25□□□□□ -0.13
FREM3P0C091 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FREM3P0C091 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FREM3P0C091 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.25□□□□□ -0.13
FREM3P0C091 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
FREM3P0C091 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FREM3P0C091 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
FREM3P0C091 ELK1P1-201ENST00000485699 580 ntBASIC14.25□□□□□ -0.13
FREM3P0C091 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.25□□□□□ -0.13
FREM3P0C091 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FREM3P0C091 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.25□□□□□ -0.13
FREM3P0C091 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.25□□□□□ -0.13
FREM3P0C091 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FREM3P0C091 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
FREM3P0C091 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.25□□□□□ -0.13
FREM3P0C091 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
FREM3P0C091 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FREM3P0C091 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FREM3P0C091 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
FREM3P0C091 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FREM3P0C091 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FREM3P0C091 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
FREM3P0C091 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
FREM3P0C091 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FREM3P0C091 AC104640.1-201ENST00000562617 2109 ntBASIC14.25□□□□□ -0.13
FREM3P0C091 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FREM3P0C091 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
FREM3P0C091 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 GAPDHP21-201ENST00000450301 1010 ntBASIC14.24□□□□□ -0.13
FREM3P0C091 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.24□□□□□ -0.13
FREM3P0C091 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.24□□□□□ -0.13
FREM3P0C091 HILS1-202ENST00000545329 423 ntBASIC14.24□□□□□ -0.13
FREM3P0C091 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.24□□□□□ -0.13
FREM3P0C091 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.24□□□□□ -0.13
FREM3P0C091 TMEM261P1-201ENST00000604899 340 ntBASIC14.24□□□□□ -0.13
FREM3P0C091 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.24□□□□□ -0.13
FREM3P0C091 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
FREM3P0C091 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.24□□□□□ -0.13
FREM3P0C091 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.24□□□□□ -0.13
FREM3P0C091 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.24□□□□□ -0.13
FREM3P0C091 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
FREM3P0C091 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.24□□□□□ -0.13
FREM3P0C091 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
FREM3P0C091 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
FREM3P0C091 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.24□□□□□ -0.13
FREM3P0C091 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FREM3P0C091 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.24□□□□□ -0.13
FREM3P0C091 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.24□□□□□ -0.13
FREM3P0C091 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.24□□□□□ -0.13
FREM3P0C091 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms