Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP2P08253 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.77■□□□□ 0.12
MMP2P08253 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.77■□□□□ 0.12
MMP2P08253 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP2P08253 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP2P08253 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
MMP2P08253 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP2P08253 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.77■□□□□ 0.12
MMP2P08253 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP2P08253 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.77■□□□□ 0.12
MMP2P08253 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.77■□□□□ 0.12
MMP2P08253 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
MMP2P08253 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.77■□□□□ 0.12
MMP2P08253 RN7SL204P-201ENST00000582831 262 ntBASIC15.77■□□□□ 0.12
MMP2P08253 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.77■□□□□ 0.12
MMP2P08253 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP2P08253 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
MMP2P08253 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MMP2P08253 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
MMP2P08253 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MMP2P08253 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
MMP2P08253 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP2P08253 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP2P08253 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.77■□□□□ 0.11
MMP2P08253 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP2P08253 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP2P08253 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP2P08253 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
MMP2P08253 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
MMP2P08253 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.76■□□□□ 0.11
MMP2P08253 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.76■□□□□ 0.11
MMP2P08253 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.76■□□□□ 0.11
MMP2P08253 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.76■□□□□ 0.11
MMP2P08253 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.76■□□□□ 0.11
MMP2P08253 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.76■□□□□ 0.11
MMP2P08253 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.76■□□□□ 0.11
MMP2P08253 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.76■□□□□ 0.11
MMP2P08253 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
MMP2P08253 RARRES2P5-201ENST00000564013 466 ntBASIC15.76■□□□□ 0.11
MMP2P08253 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.76■□□□□ 0.11
MMP2P08253 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.76■□□□□ 0.11
MMP2P08253 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
MMP2P08253 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.76■□□□□ 0.11
MMP2P08253 AC011467.4-201ENST00000594891 528 ntBASIC15.76■□□□□ 0.11
MMP2P08253 AC009118.2-201ENST00000613275 655 ntBASIC15.76■□□□□ 0.11
MMP2P08253 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.76■□□□□ 0.11
MMP2P08253 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
MMP2P08253 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
MMP2P08253 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.76■□□□□ 0.11
MMP2P08253 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
MMP2P08253 LINC00554-201ENST00000564841 3011 ntBASIC15.76■□□□□ 0.11
MMP2P08253 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
MMP2P08253 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
MMP2P08253 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.75■□□□□ 0.11
MMP2P08253 CROCCP1-201ENST00000426910 5675 ntBASIC15.75■□□□□ 0.11
MMP2P08253 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
MMP2P08253 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.75■□□□□ 0.11
MMP2P08253 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.75■□□□□ 0.11
MMP2P08253 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
MMP2P08253 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.75■□□□□ 0.11
MMP2P08253 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 RPL5P21-201ENST00000404620 815 ntBASIC15.75■□□□□ 0.11
MMP2P08253 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 TPRX2P-201ENST00000535362 881 ntBASIC15.75■□□□□ 0.11
MMP2P08253 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.75■□□□□ 0.11
MMP2P08253 AC025181.2-201ENST00000606994 802 ntBASIC15.75■□□□□ 0.11
MMP2P08253 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
MMP2P08253 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
MMP2P08253 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
MMP2P08253 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
MMP2P08253 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms