Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL5A2P05997 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC20.21■□□□□ 0.83
COL5A2P05997 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
COL5A2P05997 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.83
COL5A2P05997 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC20.2■□□□□ 0.83
COL5A2P05997 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
COL5A2P05997 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC20.2■□□□□ 0.82
COL5A2P05997 AC012313.1-201ENST00000593393 3059 ntBASIC20.2■□□□□ 0.82
COL5A2P05997 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL5A2P05997 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COL5A2P05997 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL5A2P05997 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
COL5A2P05997 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL5A2P05997 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.2■□□□□ 0.82
COL5A2P05997 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
COL5A2P05997 AL353637.1-201ENST00000451571 732 ntBASIC20.2■□□□□ 0.82
COL5A2P05997 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC20.2■□□□□ 0.82
COL5A2P05997 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC20.2■□□□□ 0.82
COL5A2P05997 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
COL5A2P05997 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC20.2■□□□□ 0.82
COL5A2P05997 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC20.2■□□□□ 0.82
COL5A2P05997 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC20.2■□□□□ 0.82
COL5A2P05997 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
COL5A2P05997 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL5A2P05997 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC20.2■□□□□ 0.82
COL5A2P05997 RN7SL736P-201ENST00000613111 269 ntBASIC20.2■□□□□ 0.82
COL5A2P05997 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL5A2P05997 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL5A2P05997 AL157791.1-201ENST00000553667 1699 ntBASIC20.2■□□□□ 0.82
COL5A2P05997 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC20.2■□□□□ 0.82
COL5A2P05997 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL5A2P05997 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.2■□□□□ 0.82
COL5A2P05997 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
COL5A2P05997 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL5A2P05997 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC20.2■□□□□ 0.82
COL5A2P05997 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL5A2P05997 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.2■□□□□ 0.82
COL5A2P05997 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
COL5A2P05997 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
COL5A2P05997 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL5A2P05997 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL5A2P05997 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC20.19■□□□□ 0.82
COL5A2P05997 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC20.19■□□□□ 0.82
COL5A2P05997 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL5A2P05997 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL5A2P05997 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL5A2P05997 AC006453.1-201ENST00000636037 1257 ntBASIC20.19■□□□□ 0.82
COL5A2P05997 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL5A2P05997 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL5A2P05997 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL5A2P05997 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
COL5A2P05997 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
COL5A2P05997 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.19■□□□□ 0.82
COL5A2P05997 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL5A2P05997 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
COL5A2P05997 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL5A2P05997 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL5A2P05997 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL5A2P05997 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL5A2P05997 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL5A2P05997 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
COL5A2P05997 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 AC010141.1-201ENST00000411585 623 ntBASIC20.18■□□□□ 0.82
COL5A2P05997 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COL5A2P05997 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC20.18■□□□□ 0.82
COL5A2P05997 RTN3P1-201ENST00000536295 711 ntBASIC20.18■□□□□ 0.82
COL5A2P05997 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC20.18■□□□□ 0.82
COL5A2P05997 AC012044.1-201ENST00000603431 297 ntBASIC20.18■□□□□ 0.82
COL5A2P05997 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC20.18■□□□□ 0.82
COL5A2P05997 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
COL5A2P05997 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 AC020763.4-201ENST00000623414 4170 ntBASIC20.18■□□□□ 0.82
COL5A2P05997 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COL5A2P05997 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.18■□□□□ 0.82
COL5A2P05997 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.18■□□□□ 0.82
COL5A2P05997 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 AC080080.1-201ENST00000625121 2420 ntBASIC20.18■□□□□ 0.82
COL5A2P05997 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.18■□□□□ 0.82
COL5A2P05997 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC20.18■□□□□ 0.82
COL5A2P05997 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL5A2P05997 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms