Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.63■□□□□ 0.57
COL1A1P02452 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 KRT8P14-201ENST00000414254 1442 ntBASIC18.63■□□□□ 0.57
COL1A1P02452 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.63■□□□□ 0.57
COL1A1P02452 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COL1A1P02452 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.63■□□□□ 0.57
COL1A1P02452 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
COL1A1P02452 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 AC006001.1-201ENST00000325130 474 ntBASIC18.63■□□□□ 0.57
COL1A1P02452 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 MIR326-201ENST00000362220 95 ntBASIC18.63■□□□□ 0.57
COL1A1P02452 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COL1A1P02452 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.63■□□□□ 0.57
COL1A1P02452 AL139094.1-201ENST00000405549 1188 ntBASIC18.63■□□□□ 0.57
COL1A1P02452 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.63■□□□□ 0.57
COL1A1P02452 HLA-K-203ENST00000430151 1046 ntBASIC18.63■□□□□ 0.57
COL1A1P02452 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.63■□□□□ 0.57
COL1A1P02452 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.63■□□□□ 0.57
COL1A1P02452 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.63■□□□□ 0.57
COL1A1P02452 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.63■□□□□ 0.57
COL1A1P02452 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.63■□□□□ 0.57
COL1A1P02452 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.63■□□□□ 0.57
COL1A1P02452 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL1A1P02452 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL1A1P02452 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL1A1P02452 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COL1A1P02452 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COL1A1P02452 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COL1A1P02452 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL1A1P02452 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL1A1P02452 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
COL1A1P02452 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL1A1P02452 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL1A1P02452 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL1A1P02452 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL1A1P02452 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL1A1P02452 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL1A1P02452 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL1A1P02452 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COL1A1P02452 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COL1A1P02452 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.62■□□□□ 0.57
COL1A1P02452 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL1A1P02452 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
COL1A1P02452 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.62■□□□□ 0.57
COL1A1P02452 AC091804.1-201ENST00000486888 567 ntBASIC18.62■□□□□ 0.57
COL1A1P02452 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.62■□□□□ 0.57
COL1A1P02452 AL118558.3-201ENST00000607414 1079 ntBASIC18.62■□□□□ 0.57
COL1A1P02452 AL022328.3-201ENST00000607943 679 ntBASIC18.62■□□□□ 0.57
COL1A1P02452 AC005695.3-201ENST00000614522 232 ntBASIC18.62■□□□□ 0.57
COL1A1P02452 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.62■□□□□ 0.57
COL1A1P02452 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COL1A1P02452 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL1A1P02452 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.62■□□□□ 0.57
COL1A1P02452 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL1A1P02452 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
COL1A1P02452 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COL1A1P02452 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.62■□□□□ 0.57
COL1A1P02452 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.62■□□□□ 0.57
COL1A1P02452 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
COL1A1P02452 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COL1A1P02452 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
COL1A1P02452 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL1A1P02452 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL1A1P02452 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COL1A1P02452 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.61■□□□□ 0.57
COL1A1P02452 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL1A1P02452 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL1A1P02452 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL1A1P02452 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.61■□□□□ 0.57
COL1A1P02452 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL1A1P02452 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC18.61■□□□□ 0.57
COL1A1P02452 AC007969.1-201ENST00000433675 447 ntBASIC18.61■□□□□ 0.57
COL1A1P02452 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COL1A1P02452 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.61■□□□□ 0.57
COL1A1P02452 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.61■□□□□ 0.57
COL1A1P02452 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL1A1P02452 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL1A1P02452 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.61■□□□□ 0.57
COL1A1P02452 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.61■□□□□ 0.57
COL1A1P02452 SAMD11P1-201ENST00000571429 661 ntBASIC18.61■□□□□ 0.57
COL1A1P02452 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.61■□□□□ 0.57
COL1A1P02452 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL1A1P02452 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.61■□□□□ 0.57
COL1A1P02452 AL645728.2-202ENST00000641679 227 ntBASIC18.61■□□□□ 0.57
COL1A1P02452 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COL1A1P02452 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COL1A1P02452 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
COL1A1P02452 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms