Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
PDE6DO43924 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.25□□□□□ -0.45
PDE6DO43924 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
PDE6DO43924 AC012569.1-201ENST00000591191 1524 ntBASIC12.25□□□□□ -0.45
PDE6DO43924 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.25□□□□□ -0.45
PDE6DO43924 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PDE6DO43924 AC092135.3-201ENST00000624151 1846 ntBASIC12.25□□□□□ -0.45
PDE6DO43924 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PDE6DO43924 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PDE6DO43924 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.25□□□□□ -0.45
PDE6DO43924 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PDE6DO43924 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
PDE6DO43924 AL928921.2-201ENST00000641325 2442 ntBASIC12.25□□□□□ -0.45
PDE6DO43924 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
PDE6DO43924 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
PDE6DO43924 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
PDE6DO43924 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
PDE6DO43924 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.24□□□□□ -0.45
PDE6DO43924 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
PDE6DO43924 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
PDE6DO43924 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
PDE6DO43924 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
PDE6DO43924 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
PDE6DO43924 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
PDE6DO43924 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.24□□□□□ -0.45
PDE6DO43924 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 NSUN5P1-202ENST00000421140 1535 ntBASIC12.24□□□□□ -0.45
PDE6DO43924 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 NSUN5P2-203ENST00000457352 1529 ntBASIC12.24□□□□□ -0.45
PDE6DO43924 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
PDE6DO43924 BX005266.1-201ENST00000473402 457 ntBASIC12.24□□□□□ -0.45
PDE6DO43924 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.24□□□□□ -0.45
PDE6DO43924 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.24□□□□□ -0.45
PDE6DO43924 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.24□□□□□ -0.45
PDE6DO43924 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.24□□□□□ -0.45
PDE6DO43924 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
PDE6DO43924 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
PDE6DO43924 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
PDE6DO43924 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
PDE6DO43924 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.24□□□□□ -0.45
PDE6DO43924 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.24□□□□□ -0.45
PDE6DO43924 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.24□□□□□ -0.45
PDE6DO43924 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 AC079781.5-202ENST00000641784 3743 ntBASIC12.24□□□□□ -0.45
PDE6DO43924 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.24□□□□□ -0.45
PDE6DO43924 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
PDE6DO43924 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
PDE6DO43924 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
PDE6DO43924 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
PDE6DO43924 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.23□□□□□ -0.45
PDE6DO43924 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.23□□□□□ -0.45
PDE6DO43924 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.23□□□□□ -0.45
PDE6DO43924 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
PDE6DO43924 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
PDE6DO43924 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PDE6DO43924 MIR935-201ENST00000401179 91 ntBASIC12.23□□□□□ -0.45
PDE6DO43924 PTCHD3P3-201ENST00000403073 906 ntBASIC12.23□□□□□ -0.45
PDE6DO43924 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
PDE6DO43924 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
PDE6DO43924 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms