Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.67■□□□□ 0.42
CHMP2AO43633 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP2AO43633 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.67■□□□□ 0.42
CHMP2AO43633 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHMP2AO43633 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.67■□□□□ 0.42
CHMP2AO43633 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP2AO43633 AC036164.1-201ENST00000570544 333 ntBASIC17.67■□□□□ 0.42
CHMP2AO43633 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
CHMP2AO43633 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMP2AO43633 AL391069.4-201ENST00000609583 481 ntBASIC17.67■□□□□ 0.42
CHMP2AO43633 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP2AO43633 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMP2AO43633 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.67■□□□□ 0.42
CHMP2AO43633 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHMP2AO43633 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHMP2AO43633 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMP2AO43633 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
CHMP2AO43633 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP2AO43633 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHMP2AO43633 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 AC092850.2-201ENST00000623821 2697 ntBASIC17.66■□□□□ 0.42
CHMP2AO43633 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMP2AO43633 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 TOMM22P5-201ENST00000416399 439 ntBASIC17.66■□□□□ 0.42
CHMP2AO43633 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMP2AO43633 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP2AO43633 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMP2AO43633 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMP2AO43633 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP2AO43633 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMP2AO43633 AC093726.1-201ENST00000608064 963 ntBASIC17.66■□□□□ 0.42
CHMP2AO43633 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.66■□□□□ 0.42
CHMP2AO43633 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CHMP2AO43633 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP2AO43633 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.66■□□□□ 0.42
CHMP2AO43633 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMP2AO43633 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHMP2AO43633 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.66■□□□□ 0.42
CHMP2AO43633 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMP2AO43633 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP2AO43633 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP2AO43633 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CHMP2AO43633 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.65■□□□□ 0.42
CHMP2AO43633 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
CHMP2AO43633 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP2AO43633 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP2AO43633 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP2AO43633 AC099568.2-201ENST00000609194 695 ntBASIC17.65■□□□□ 0.42
CHMP2AO43633 AC012645.4-201ENST00000610691 1061 ntBASIC17.65■□□□□ 0.42
CHMP2AO43633 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CHMP2AO43633 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CHMP2AO43633 AL121723.1-201ENST00000445194 1519 ntBASIC17.65■□□□□ 0.42
CHMP2AO43633 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP2AO43633 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHMP2AO43633 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP2AO43633 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.65■□□□□ 0.42
CHMP2AO43633 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHMP2AO43633 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CHMP2AO43633 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.65■□□□□ 0.42
CHMP2AO43633 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHMP2AO43633 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CHMP2AO43633 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CHMP2AO43633 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.42
CHMP2AO43633 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms