Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RNF13O43567 AC004987.2-201ENST00000395959 1148 ntBASIC14.39□□□□□ -0.11
RNF13O43567 BX842568.4-201ENST00000421222 227 ntBASIC14.39□□□□□ -0.11
RNF13O43567 KRT18P32-201ENST00000424695 1287 ntBASIC14.39□□□□□ -0.11
RNF13O43567 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF13O43567 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.39□□□□□ -0.11
RNF13O43567 AL139010.1-201ENST00000454878 894 ntBASIC14.39□□□□□ -0.11
RNF13O43567 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.39□□□□□ -0.11
RNF13O43567 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF13O43567 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF13O43567 AC010327.4-202ENST00000591484 748 ntBASIC14.39□□□□□ -0.11
RNF13O43567 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF13O43567 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RNF13O43567 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF13O43567 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
RNF13O43567 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.39□□□□□ -0.11
RNF13O43567 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
RNF13O43567 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.39□□□□□ -0.11
RNF13O43567 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RNF13O43567 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF13O43567 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF13O43567 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF13O43567 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF13O43567 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF13O43567 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RNF13O43567 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.38□□□□□ -0.11
RNF13O43567 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RNF13O43567 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RNF13O43567 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF13O43567 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RNF13O43567 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RNF13O43567 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RNF13O43567 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.38□□□□□ -0.11
RNF13O43567 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF13O43567 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.38□□□□□ -0.11
RNF13O43567 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF13O43567 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RNF13O43567 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF13O43567 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.38□□□□□ -0.11
RNF13O43567 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF13O43567 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF13O43567 RARRES2P9-201ENST00000565168 469 ntBASIC14.38□□□□□ -0.11
RNF13O43567 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.38□□□□□ -0.11
RNF13O43567 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
RNF13O43567 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF13O43567 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RNF13O43567 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
RNF13O43567 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.38□□□□□ -0.11
RNF13O43567 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.38□□□□□ -0.11
RNF13O43567 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RNF13O43567 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.38□□□□□ -0.11
RNF13O43567 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RNF13O43567 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RNF13O43567 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RNF13O43567 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 MYO15B-237ENST00000642007 4893 ntBASIC14.37□□□□□ -0.11
RNF13O43567 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RNF13O43567 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.37□□□□□ -0.11
RNF13O43567 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RNF13O43567 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RNF13O43567 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms