Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHGDHO43175 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHGDHO43175 AZGP1P1-201ENST00000411909 902 ntBASIC15.7■□□□□ 0.1
PHGDHO43175 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.7■□□□□ 0.1
PHGDHO43175 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.7■□□□□ 0.1
PHGDHO43175 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.7■□□□□ 0.1
PHGDHO43175 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.7■□□□□ 0.1
PHGDHO43175 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHGDHO43175 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
PHGDHO43175 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.7■□□□□ 0.1
PHGDHO43175 AC097359.3-201ENST00000603982 1210 ntBASIC15.7■□□□□ 0.1
PHGDHO43175 AC026979.3-201ENST00000607315 403 ntBASIC15.7■□□□□ 0.1
PHGDHO43175 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PHGDHO43175 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.7■□□□□ 0.1
PHGDHO43175 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.7■□□□□ 0.1
PHGDHO43175 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.7■□□□□ 0.1
PHGDHO43175 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHGDHO43175 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PHGDHO43175 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
PHGDHO43175 KRT8P44-201ENST00000441609 1350 ntBASIC15.7■□□□□ 0.1
PHGDHO43175 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHGDHO43175 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHGDHO43175 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHGDHO43175 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PHGDHO43175 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHGDHO43175 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHGDHO43175 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHGDHO43175 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHGDHO43175 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PHGDHO43175 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHGDHO43175 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PHGDHO43175 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.7■□□□□ 0.1
PHGDHO43175 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.7■□□□□ 0.1
PHGDHO43175 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PHGDHO43175 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.7■□□□□ 0.1
PHGDHO43175 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PHGDHO43175 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PHGDHO43175 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
PHGDHO43175 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 CICP24-201ENST00000605464 2705 ntBASIC15.69■□□□□ 0.1
PHGDHO43175 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PHGDHO43175 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.69■□□□□ 0.1
PHGDHO43175 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PHGDHO43175 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.69■□□□□ 0.1
PHGDHO43175 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.69■□□□□ 0.1
PHGDHO43175 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 CEND1P1-201ENST00000451006 455 ntBASIC15.69■□□□□ 0.1
PHGDHO43175 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.69■□□□□ 0.1
PHGDHO43175 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PHGDHO43175 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.69■□□□□ 0.1
PHGDHO43175 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.69■□□□□ 0.1
PHGDHO43175 AC022145.2-201ENST00000598203 171 ntBASIC15.69■□□□□ 0.1
PHGDHO43175 MTDHP5-201ENST00000598980 586 ntBASIC15.69■□□□□ 0.1
PHGDHO43175 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PHGDHO43175 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.69■□□□□ 0.1
PHGDHO43175 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.69■□□□□ 0.1
PHGDHO43175 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PHGDHO43175 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.69■□□□□ 0.1
PHGDHO43175 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.69■□□□□ 0.1
PHGDHO43175 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.69■□□□□ 0.1
PHGDHO43175 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PHGDHO43175 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PHGDHO43175 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PHGDHO43175 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PHGDHO43175 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PHGDHO43175 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 ELL2P1-201ENST00000413990 1906 ntBASIC15.68■□□□□ 0.1
PHGDHO43175 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.68■□□□□ 0.1
PHGDHO43175 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
PHGDHO43175 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PHGDHO43175 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.68■□□□□ 0.1
PHGDHO43175 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PHGDHO43175 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.68■□□□□ 0.1
PHGDHO43175 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 265.6 ms