Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 ACTBP7-201ENST00000418351 1124 ntBASIC19.26■□□□□ 0.67
RGPD3A6NKT7 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 AL157407.1-201ENST00000435784 904 ntBASIC19.26■□□□□ 0.67
RGPD3A6NKT7 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 AC024293.1-201ENST00000467930 498 ntBASIC19.26■□□□□ 0.67
RGPD3A6NKT7 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RGPD3A6NKT7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 ALG3P1-201ENST00000508806 1114 ntBASIC19.25■□□□□ 0.67
RGPD3A6NKT7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 AC093752.3-201ENST00000567343 901 ntBASIC19.25■□□□□ 0.67
RGPD3A6NKT7 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RGPD3A6NKT7 UBALD1-205ENST00000590891 2641 ntBASIC19.25■□□□□ 0.67
RGPD3A6NKT7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 AC026320.2-201ENST00000434379 478 ntBASIC19.24■□□□□ 0.67
RGPD3A6NKT7 AC004837.1-201ENST00000446267 564 ntBASIC19.24■□□□□ 0.67
RGPD3A6NKT7 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 LINC00634-202ENST00000505157 222 ntBASIC19.24■□□□□ 0.67
RGPD3A6NKT7 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RGPD3A6NKT7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 MBP-201ENST00000354542 575 ntTSL 2 BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 AC106886.4-201ENST00000623557 2502 ntBASIC19.23■□□□□ 0.67
RGPD3A6NKT7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 RNF216P1-203ENST00000404404 2427 ntBASIC19.23■□□□□ 0.67
RGPD3A6NKT7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RGPD3A6NKT7 AC015909.3-201ENST00000572855 1794 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms