Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.94□□□□□ -0.02
LRIT2A6NDA9 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 AC138969.3-201ENST00000546612 1459 ntBASIC14.94□□□□□ -0.02
LRIT2A6NDA9 AC138932.2-201ENST00000548268 1459 ntBASIC14.94□□□□□ -0.02
LRIT2A6NDA9 AC126755.4-201ENST00000549796 1459 ntBASIC14.94□□□□□ -0.02
LRIT2A6NDA9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.94□□□□□ -0.02
LRIT2A6NDA9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 AL133267.1-201ENST00000398220 340 ntBASIC14.93□□□□□ -0.02
LRIT2A6NDA9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 SPDYE18-201ENST00000510091 1050 ntBASIC14.93□□□□□ -0.02
LRIT2A6NDA9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 SRD5A3P1-201ENST00000603021 949 ntBASIC14.93□□□□□ -0.02
LRIT2A6NDA9 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LRIT2A6NDA9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms