Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
TMEM129A0AVI4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.27□□□□□ -0.12
TMEM129A0AVI4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
TMEM129A0AVI4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 AL139400.1-201ENST00000366220 510 ntBASIC14.27□□□□□ -0.13
TMEM129A0AVI4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 METTL21AP1-201ENST00000438852 635 ntBASIC14.27□□□□□ -0.13
TMEM129A0AVI4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 AC079140.1-201ENST00000508039 487 ntBASIC14.27□□□□□ -0.13
TMEM129A0AVI4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 AC093520.2-201ENST00000561830 333 ntBASIC14.27□□□□□ -0.13
TMEM129A0AVI4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM129A0AVI4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.26□□□□□ -0.13
TMEM129A0AVI4 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 LINC01225-203ENST00000563550 1244 ntBASIC14.26□□□□□ -0.13
TMEM129A0AVI4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM129A0AVI4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms