Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV5A0A0B4J1U4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV5A0A0B4J1U4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 AL355864.2-201ENST00000447420 863 ntBASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 AC026410.3-201ENST00000514280 936 ntBASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 AC068587.3-201ENST00000526613 355 ntBASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 AP001063.1-201ENST00000568332 529 ntBASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 DRD5P1-201ENST00000456605 1438 ntBASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRGV5A0A0B4J1U4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 AC084018.2-201ENST00000613093 2607 ntBASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 CROCCP4-201ENST00000457096 498 ntBASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 AP005482.1-201ENST00000563722 1273 ntBASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 AL603832.2-201ENST00000566195 2125 ntBASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 AC107373.2-201ENST00000607735 490 ntBASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TRGV5A0A0B4J1U4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms