Protein–RNA interactions for Protein: Q9Y6M7

SLC4A7, Sodium bicarbonate cotransporter 3, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A7Q9Y6M7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 AL607033.1-201ENST00000623900 1599 ntBASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC4A7Q9Y6M7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 Z93015.1-201ENST00000451718 390 ntBASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 AC244452.3-201ENST00000636814 210 ntBASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 TSPY26P-202ENST00000565928 3884 ntBASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC4A7Q9Y6M7 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC4A7Q9Y6M7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms