Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PMS2P7-201ENST00000506558 1336 ntBASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 AF186996.4-201ENST00000467186 377 ntBASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 RNA5SP419-201ENST00000515908 135 ntBASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 AC008667.4-201ENST00000607370 168 ntBASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 AC107918.4-202ENST00000641623 219 ntBASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 AC136759.1-202ENST00000530858 2194 ntBASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PCDHGB1Q9Y5G3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 BX842568.4-201ENST00000421222 227 ntBASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 AC136632.2-201ENST00000512891 861 ntBASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 AP001282.1-201ENST00000531301 1499 ntBASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 HSPA7-201ENST00000445535 1927 ntBASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PCDHGB1Q9Y5G3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PCDHGB1Q9Y5G3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms