Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTDP1Q9Y5B0 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 VDAC1P7-201ENST00000462417 847 ntBASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 SLC25A47P1-201ENST00000531577 414 ntBASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 PTP4A1P2-201ENST00000546033 454 ntBASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 AP005482.1-201ENST00000563722 1273 ntBASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 AC018892.3-201ENST00000623986 2499 ntBASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 AC018665.1-201ENST00000622927 1362 ntBASIC18.16■□□□□ 0.5
CTDP1Q9Y5B0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 ACTG1P3-201ENST00000431775 1114 ntBASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 RPS2P32-201ENST00000439199 892 ntBASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 AC104989.1-201ENST00000519711 778 ntBASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 AC120045.2-201ENST00000567334 178 ntBASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 AC097359.3-201ENST00000603982 1210 ntBASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 AL022328.1-201ENST00000610050 478 ntBASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.15■□□□□ 0.5
CTDP1Q9Y5B0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms