Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 FAM8A3P-201ENST00000427218 844 ntBASIC14.94□□□□□ -0.02
AP4S1Q9Y587 GPX1P2-201ENST00000429271 606 ntBASIC14.94□□□□□ -0.02
AP4S1Q9Y587 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.94□□□□□ -0.02
AP4S1Q9Y587 DUX4L26-201ENST00000489078 1255 ntBASIC14.94□□□□□ -0.02
AP4S1Q9Y587 RPS15P9-201ENST00000494093 319 ntBASIC14.94□□□□□ -0.02
AP4S1Q9Y587 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 MTDHP3-201ENST00000594186 672 ntBASIC14.94□□□□□ -0.02
AP4S1Q9Y587 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
AP4S1Q9Y587 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 AL589702.1-201ENST00000641229 1509 ntBASIC14.93□□□□□ -0.02
AP4S1Q9Y587 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 BX640514.1-201ENST00000583223 1918 ntBASIC14.93□□□□□ -0.02
AP4S1Q9Y587 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
AP4S1Q9Y587 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.92□□□□□ -0.02
AP4S1Q9Y587 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.92□□□□□ -0.02
AP4S1Q9Y587 AC027601.5-201ENST00000624065 2482 ntBASIC14.92□□□□□ -0.02
AP4S1Q9Y587 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP4S1Q9Y587 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
AP4S1Q9Y587 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.92□□□□□ -0.02
AP4S1Q9Y587 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP4S1Q9Y587 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.92□□□□□ -0.02
AP4S1Q9Y587 AC010327.5-201ENST00000586923 3061 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms