Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 KRT43P-201ENST00000434019 910 ntBASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 AC245100.3-201ENST00000441281 285 ntBASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 AL139010.1-201ENST00000454878 894 ntBASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 WFDC1-204ENST00000613603 549 ntBASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 MIR6775-201ENST00000617557 69 ntBASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 AL033527.5-201ENST00000641382 801 ntBASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 AL109936.8-201ENST00000641772 604 ntBASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.27■□□□□ 0.84
PDZRN3Q9UPQ7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC20.27■□□□□ 0.83
PDZRN3Q9UPQ7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDZRN3Q9UPQ7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
PDZRN3Q9UPQ7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
PDZRN3Q9UPQ7 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDZRN3Q9UPQ7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PDZRN3Q9UPQ7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 PPT1-215ENST00000641471 2368 ntBASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 AC104989.1-201ENST00000519711 778 ntBASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 AC074044.1-201ENST00000609673 707 ntBASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDZRN3Q9UPQ7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 AC104596.2-201ENST00000512793 793 ntBASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 RARRES2P5-201ENST00000564013 466 ntBASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 AC008735.3-201ENST00000596646 500 ntBASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 MIR8072-201ENST00000614241 80 ntBASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDZRN3Q9UPQ7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDZRN3Q9UPQ7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms