Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZNRF3Q9ULT6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 AC104457.1-201ENST00000401024 814 ntBASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 RN7SL11P-201ENST00000471305 293 ntBASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 FTLP10-202ENST00000505798 471 ntBASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 AC134698.3-201ENST00000523880 214 ntBASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 KRT8P14-201ENST00000414254 1442 ntBASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 AC007787.1-201ENST00000588095 1583 ntBASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 AC020916.1-201ENST00000587762 1774 ntBASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNRF3Q9ULT6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 MPV17-204ENST00000399052 749 ntTSL 4 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 POM121L8P-201ENST00000417732 1281 ntBASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 POM121L9P-203ENST00000441984 1285 ntBASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 AC022217.1-201ENST00000521069 738 ntBASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 FGFR3P5-201ENST00000564496 886 ntBASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 MIR3907-201ENST00000579424 151 ntBASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 AP001002.3-201ENST00000623482 206 ntBASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 KRT8P4-201ENST00000509735 1454 ntBASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNRF3Q9ULT6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNRF3Q9ULT6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms