Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 LSM5-207ENST00000410044 687 ntTSL 3 BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 AC093433.1-201ENST00000458048 571 ntBASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 AC106886.1-201ENST00000568660 600 ntBASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
NPC1L1Q9UHC9 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 AC068587.3-201ENST00000526613 355 ntBASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 GNRHR2-203ENST00000581100 1187 ntBASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 PAUPAR-201ENST00000630360 2965 ntBASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
NPC1L1Q9UHC9 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 TTTY23B-201ENST00000442790 549 ntBASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 GIMAP3P-201ENST00000495150 836 ntBASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 DUX4L47-201ENST00000566374 394 ntBASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 AL603764.1-201ENST00000636452 321 ntBASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 AL360270.3-201ENST00000609118 1348 ntBASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 MSTO2P-201ENST00000314835 1709 ntBASIC20.86■□□□□ 0.93
NPC1L1Q9UHC9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms