Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 MYCLP2-201ENST00000449268 967 ntBASIC15.82■□□□□ 0.12
DKK3Q9UBP4 RN7SL692P-201ENST00000464677 288 ntBASIC15.82■□□□□ 0.12
DKK3Q9UBP4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 AC008494.3-201ENST00000606615 944 ntBASIC15.82■□□□□ 0.12
DKK3Q9UBP4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 AC012645.4-201ENST00000610691 1061 ntBASIC15.82■□□□□ 0.12
DKK3Q9UBP4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.82■□□□□ 0.12
DKK3Q9UBP4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.82■□□□□ 0.12
DKK3Q9UBP4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 DGCR5-201ENST00000399539 862 ntBASIC15.81■□□□□ 0.12
DKK3Q9UBP4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 KRT18P43-201ENST00000469825 1281 ntBASIC15.81■□□□□ 0.12
DKK3Q9UBP4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 AC104596.2-201ENST00000512793 793 ntBASIC15.81■□□□□ 0.12
DKK3Q9UBP4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 CR383656.12-201ENST00000549567 513 ntBASIC15.81■□□□□ 0.12
DKK3Q9UBP4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 AC000095.1-201ENST00000603208 874 ntBASIC15.81■□□□□ 0.12
DKK3Q9UBP4 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
DKK3Q9UBP4 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.8■□□□□ 0.12
DKK3Q9UBP4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DKK3Q9UBP4 AC026691.1-201ENST00000602502 2017 ntBASIC15.8■□□□□ 0.12
DKK3Q9UBP4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DKK3Q9UBP4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
DKK3Q9UBP4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DKK3Q9UBP4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
DKK3Q9UBP4 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
DKK3Q9UBP4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DKK3Q9UBP4 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DKK3Q9UBP4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
DKK3Q9UBP4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
DKK3Q9UBP4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms