Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 SPDYE9P-201ENST00000570642 692 ntBASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 SPDYE10P-202ENST00000612005 668 ntBASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 SPDYE8P-202ENST00000612377 668 ntBASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 AC079781.4-201ENST00000641908 219 ntBASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.16□□□□□ -0.3
LIN7CQ9NUP9 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 PRYP6-201ENST00000514804 343 ntBASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 AL135744.1-201ENST00000565098 629 ntBASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LIN7CQ9NUP9 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
LIN7CQ9NUP9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 AP006288.1-201ENST00000446065 395 ntBASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 AC004967.1-201ENST00000453589 447 ntBASIC13.14□□□□□ -0.31
LIN7CQ9NUP9 AP000344.2-201ENST00000512987 629 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms