Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 DOC2GP-202ENST00000514950 1163 ntBASIC16.75■□□□□ 0.27
CISHQ9NSE2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 TMBIM7P-203ENST00000641617 1718 ntBASIC16.75■□□□□ 0.27
CISHQ9NSE2 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CISHQ9NSE2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CISHQ9NSE2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 PPT1-215ENST00000641471 2368 ntBASIC16.74■□□□□ 0.27
CISHQ9NSE2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 MIR661-201ENST00000384842 89 ntBASIC16.74■□□□□ 0.27
CISHQ9NSE2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 SERBP1P5-201ENST00000510079 1181 ntBASIC16.74■□□□□ 0.27
CISHQ9NSE2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 AC015910.1-201ENST00000579400 975 ntBASIC16.74■□□□□ 0.27
CISHQ9NSE2 AC009118.2-201ENST00000613275 655 ntBASIC16.74■□□□□ 0.27
CISHQ9NSE2 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 AL121723.1-201ENST00000445194 1519 ntBASIC16.74■□□□□ 0.27
CISHQ9NSE2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CISHQ9NSE2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CISHQ9NSE2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 AC073347.1-201ENST00000421633 2643 ntBASIC16.73■□□□□ 0.27
CISHQ9NSE2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 SPDYE19P-201ENST00000338590 713 ntBASIC16.73■□□□□ 0.27
CISHQ9NSE2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 AL133267.1-201ENST00000398220 340 ntBASIC16.73■□□□□ 0.27
CISHQ9NSE2 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 GNAQP1-201ENST00000444815 1067 ntBASIC16.73■□□□□ 0.27
CISHQ9NSE2 SPTLC1P1-201ENST00000447199 261 ntBASIC16.73■□□□□ 0.27
CISHQ9NSE2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 KRT18P43-201ENST00000469825 1281 ntBASIC16.73■□□□□ 0.27
CISHQ9NSE2 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CISHQ9NSE2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CISHQ9NSE2 AL158212.4-201ENST00000624062 1286 ntBASIC16.73■□□□□ 0.27
CISHQ9NSE2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms