Protein–RNA interactions for Protein: Q9HCM2

PLXNA4, Plexin-A4, humanhuman

Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA4Q9HCM2 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 FGFR3P5-201ENST00000564496 886 ntBASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLXNA4Q9HCM2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 AC104457.1-201ENST00000401024 814 ntBASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 COX5BP1-201ENST00000507622 393 ntBASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 MIR4783-201ENST00000580343 82 ntBASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 MIR769-201ENST00000390225 118 ntBASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 CD8B2-202ENST00000417670 633 ntBASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 SAMD11P1-201ENST00000571429 661 ntBASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 SPCS2P2-201ENST00000603270 608 ntBASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 AC007663.3-201ENST00000609632 465 ntBASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PLXNA4Q9HCM2 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 AC008132.1-202ENST00000342005 1389 ntBASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 TPM3P8-201ENST00000330554 643 ntBASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.28■□□□□ 0.2
PLXNA4Q9HCM2 MIR4706-201ENST00000582134 82 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms