Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
UPF2Q9HAU5 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
UPF2Q9HAU5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
UPF2Q9HAU5 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
UPF2Q9HAU5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UPF2Q9HAU5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.39■□□□□ 0.7
UPF2Q9HAU5 REXO1L1P-202ENST00000608646 1974 ntBASIC19.39■□□□□ 0.7
UPF2Q9HAU5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 VN2R19P-201ENST00000442399 1052 ntBASIC19.39■□□□□ 0.69
UPF2Q9HAU5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 FAM197Y8-203ENST00000450145 560 ntBASIC19.39■□□□□ 0.69
UPF2Q9HAU5 AC018712.1-201ENST00000455767 687 ntBASIC19.39■□□□□ 0.69
UPF2Q9HAU5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 FGD5P1-202ENST00000614866 2498 ntBASIC19.39■□□□□ 0.69
UPF2Q9HAU5 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
UPF2Q9HAU5 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 HNRNPDP1-201ENST00000439535 754 ntBASIC19.38■□□□□ 0.69
UPF2Q9HAU5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 C1R-202ENST00000536053 2347 ntTSL 2 BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.38■□□□□ 0.69
UPF2Q9HAU5 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms