Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 HSPB1P2-201ENST00000448722 546 ntBASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 PPY2P-201ENST00000582808 702 ntBASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 AC092171.5-201ENST00000608012 942 ntBASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 AC010503.4-201ENST00000615487 688 ntBASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 AC103691.2-201ENST00000618824 433 ntBASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CNTNAP3Q9BZ76 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 AC026316.1-201ENST00000398900 414 ntBASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 ACTG1P2-201ENST00000415776 1125 ntBASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 ACTG1P11-201ENST00000425411 1125 ntBASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 ETV2-207ENST00000619399 994 ntTSL 5 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CNTNAP3Q9BZ76 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.96□□□□□ -0.01
CNTNAP3Q9BZ76 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNTNAP3Q9BZ76 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNTNAP3Q9BZ76 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNTNAP3Q9BZ76 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.96□□□□□ -0.01
CNTNAP3Q9BZ76 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNTNAP3Q9BZ76 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNTNAP3Q9BZ76 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CNTNAP3Q9BZ76 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CNTNAP3Q9BZ76 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms