Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 LINC02002-201ENST00000578977 1481 ntTSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AL139385.1-201ENST00000611744 3272 ntBASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
KRTAP3-3Q9BYR6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AC102945.2-201ENST00000623026 1422 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 IL37-201ENST00000263326 772 ntAPPRIS P4 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 UNC93B3-201ENST00000308076 687 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 TTLL1-202ENST00000331018 1185 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 RNU4-21P-201ENST00000362802 126 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 CIART-202ENST00000369094 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 OR1L1-202ENST00000373686 1083 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 GK-202ENST00000378941 458 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC02271-201ENST00000398777 546 ntTSL 4 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 ST13P16-201ENST00000401760 781 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 MIR548I3-201ENST00000408378 149 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 MIR548I1-201ENST00000408810 149 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 IGKV1OR2-3-201ENST00000411475 288 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 CBX3P6-201ENST00000430257 527 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AF130417.1-201ENST00000432412 478 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 SPTLC1P4-201ENST00000435997 260 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AC006326.1-201ENST00000445465 787 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 CABYRP1-201ENST00000465493 1045 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 DPY19L2P4-201ENST00000479881 442 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC01965-202ENST00000537492 552 ntTSL 4 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AC018563.1-201ENST00000558089 566 ntTSL 4 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 MIR3149-201ENST00000584629 83 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 NDUFV2P1-201ENST00000596415 907 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AC053503.5-201ENST00000601508 636 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 IGKV1OR2-9-201ENST00000603957 287 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 IGKV1OR2-11-201ENST00000604120 287 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AP000894.4-201ENST00000610185 483 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AL589743.7-201ENST00000612637 233 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AC005154.1-207ENST00000625565 597 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AC012594.1-273ENST00000626618 816 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AL109936.8-201ENST00000641772 604 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 AC105233.4-201ENST00000642045 216 ntBASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
KRTAP3-3Q9BYR6 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms