Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
COL12A1Q99715 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.45□□□□□ -0.26
COL12A1Q99715 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COL12A1Q99715 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.45□□□□□ -0.26
COL12A1Q99715 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL12A1Q99715 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL12A1Q99715 KLF2P2-201ENST00000416807 1039 ntBASIC13.45□□□□□ -0.26
COL12A1Q99715 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.45□□□□□ -0.26
COL12A1Q99715 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC13.45□□□□□ -0.26
COL12A1Q99715 NAP1L6-202ENST00000641404 1222 ntBASIC13.45□□□□□ -0.26
COL12A1Q99715 AC002472.4-201ENST00000641915 272 ntBASIC13.45□□□□□ -0.26
COL12A1Q99715 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COL12A1Q99715 ENPP7P8-202ENST00000527856 1345 ntBASIC13.45□□□□□ -0.26
COL12A1Q99715 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
COL12A1Q99715 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.45□□□□□ -0.26
COL12A1Q99715 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COL12A1Q99715 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL12A1Q99715 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL12A1Q99715 RNU1-114P-201ENST00000365297 166 ntBASIC13.45□□□□□ -0.26
COL12A1Q99715 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COL12A1Q99715 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL12A1Q99715 AQP7P5-201ENST00000428759 1049 ntBASIC13.45□□□□□ -0.26
COL12A1Q99715 AQP7P4-201ENST00000447083 1042 ntBASIC13.45□□□□□ -0.26
COL12A1Q99715 AQP7P2-201ENST00000453967 1041 ntBASIC13.45□□□□□ -0.26
COL12A1Q99715 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.45□□□□□ -0.26
COL12A1Q99715 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.45□□□□□ -0.26
COL12A1Q99715 THY1-209ENST00000580275 578 ntTSL 3 BASIC13.45□□□□□ -0.26
COL12A1Q99715 ZACNP1-201ENST00000612259 710 ntBASIC13.45□□□□□ -0.26
COL12A1Q99715 AQP7P3-201ENST00000624547 1041 ntBASIC13.45□□□□□ -0.26
COL12A1Q99715 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL12A1Q99715 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL12A1Q99715 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.45□□□□□ -0.26
COL12A1Q99715 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL12A1Q99715 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.44□□□□□ -0.26
COL12A1Q99715 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.44□□□□□ -0.26
COL12A1Q99715 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
COL12A1Q99715 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 MST1L-201ENST00000442552 2185 ntBASIC13.44□□□□□ -0.26
COL12A1Q99715 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.44□□□□□ -0.26
COL12A1Q99715 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
COL12A1Q99715 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
COL12A1Q99715 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.44□□□□□ -0.26
COL12A1Q99715 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.44□□□□□ -0.26
COL12A1Q99715 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 MRPL37P1-201ENST00000592451 1337 ntBASIC13.44□□□□□ -0.26
COL12A1Q99715 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.44□□□□□ -0.26
COL12A1Q99715 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COL12A1Q99715 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 AC009093.2-202ENST00000620513 2079 ntBASIC13.44□□□□□ -0.26
COL12A1Q99715 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
COL12A1Q99715 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.44□□□□□ -0.26
COL12A1Q99715 AC018463.1-201ENST00000456674 917 ntBASIC13.44□□□□□ -0.26
COL12A1Q99715 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.44□□□□□ -0.26
COL12A1Q99715 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.44□□□□□ -0.26
COL12A1Q99715 AC011247.3-201ENST00000603297 438 ntBASIC13.44□□□□□ -0.26
COL12A1Q99715 AP001002.3-201ENST00000623482 206 ntBASIC13.44□□□□□ -0.26
COL12A1Q99715 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.44□□□□□ -0.26
COL12A1Q99715 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
COL12A1Q99715 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.44□□□□□ -0.26
COL12A1Q99715 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.44□□□□□ -0.26
COL12A1Q99715 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 AL157791.1-201ENST00000553667 1699 ntBASIC13.44□□□□□ -0.26
COL12A1Q99715 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
COL12A1Q99715 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL12A1Q99715 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL12A1Q99715 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL12A1Q99715 RN7SL67P-201ENST00000492147 296 ntBASIC13.43□□□□□ -0.26
COL12A1Q99715 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.43□□□□□ -0.26
COL12A1Q99715 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.43□□□□□ -0.26
COL12A1Q99715 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
COL12A1Q99715 AC025262.2-201ENST00000623975 1056 ntBASIC13.43□□□□□ -0.26
COL12A1Q99715 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.43□□□□□ -0.26
COL12A1Q99715 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL12A1Q99715 AC022188.1-201ENST00000620960 1664 ntBASIC13.43□□□□□ -0.26
COL12A1Q99715 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL12A1Q99715 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL12A1Q99715 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.43□□□□□ -0.26
COL12A1Q99715 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.43□□□□□ -0.26
COL12A1Q99715 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
COL12A1Q99715 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL12A1Q99715 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL12A1Q99715 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
COL12A1Q99715 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms