Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CHMP6Q96FZ7 AC027601.5-201ENST00000624065 2482 ntBASIC15.94■□□□□ 0.14
CHMP6Q96FZ7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP6Q96FZ7 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP6Q96FZ7 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP6Q96FZ7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP6Q96FZ7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP6Q96FZ7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP6Q96FZ7 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP6Q96FZ7 PI4KAP1-204ENST00000612579 1703 ntBASIC15.94■□□□□ 0.14
CHMP6Q96FZ7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP6Q96FZ7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CHMP6Q96FZ7 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CHMP6Q96FZ7 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 AL355877.3-201ENST00000622820 899 ntBASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 AC127383.1-201ENST00000444697 1800 ntBASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CHMP6Q96FZ7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 SAPCD2P3-201ENST00000455031 850 ntBASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 MTDHP4-201ENST00000600287 670 ntBASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 IFNL4P1-201ENST00000607083 540 ntBASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 AC134407.2-201ENST00000625089 1978 ntBASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CHMP6Q96FZ7 HSPA7-201ENST00000445535 1927 ntBASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms