Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.77□□□□□ -0.53
RNF183Q96D59 MRPS18AP1-201ENST00000414458 589 ntBASIC11.77□□□□□ -0.53
RNF183Q96D59 AL080243.2-201ENST00000418783 582 ntBASIC11.77□□□□□ -0.53
RNF183Q96D59 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.77□□□□□ -0.53
RNF183Q96D59 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.77□□□□□ -0.53
RNF183Q96D59 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.77□□□□□ -0.53
RNF183Q96D59 MIR4321-201ENST00000592276 80 ntBASIC11.77□□□□□ -0.53
RNF183Q96D59 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC11.77□□□□□ -0.53
RNF183Q96D59 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
RNF183Q96D59 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.77□□□□□ -0.53
RNF183Q96D59 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
RNF183Q96D59 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC11.77□□□□□ -0.53
RNF183Q96D59 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.77□□□□□ -0.53
RNF183Q96D59 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC11.77□□□□□ -0.53
RNF183Q96D59 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.77□□□□□ -0.53
RNF183Q96D59 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
RNF183Q96D59 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.77□□□□□ -0.53
RNF183Q96D59 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.77□□□□□ -0.53
RNF183Q96D59 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC11.77□□□□□ -0.53
RNF183Q96D59 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
RNF183Q96D59 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RNF183Q96D59 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.77□□□□□ -0.53
RNF183Q96D59 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.77□□□□□ -0.53
RNF183Q96D59 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.76□□□□□ -0.53
RNF183Q96D59 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RNF183Q96D59 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RNF183Q96D59 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC11.76□□□□□ -0.53
RNF183Q96D59 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.76□□□□□ -0.53
RNF183Q96D59 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.76□□□□□ -0.53
RNF183Q96D59 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC11.76□□□□□ -0.53
RNF183Q96D59 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC11.76□□□□□ -0.53
RNF183Q96D59 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RNF183Q96D59 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 AL365203.3-201ENST00000609742 2057 ntBASIC11.76□□□□□ -0.53
RNF183Q96D59 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.76□□□□□ -0.53
RNF183Q96D59 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.76□□□□□ -0.53
RNF183Q96D59 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 MIR661-201ENST00000384842 89 ntBASIC11.76□□□□□ -0.53
RNF183Q96D59 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.76□□□□□ -0.53
RNF183Q96D59 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.76□□□□□ -0.53
RNF183Q96D59 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC11.76□□□□□ -0.53
RNF183Q96D59 AC009477.1-201ENST00000452936 217 ntBASIC11.76□□□□□ -0.53
RNF183Q96D59 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC11.76□□□□□ -0.53
RNF183Q96D59 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.76□□□□□ -0.53
RNF183Q96D59 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC11.76□□□□□ -0.53
RNF183Q96D59 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.76□□□□□ -0.53
RNF183Q96D59 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.76□□□□□ -0.53
RNF183Q96D59 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.76□□□□□ -0.53
RNF183Q96D59 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.76□□□□□ -0.53
RNF183Q96D59 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC11.76□□□□□ -0.53
RNF183Q96D59 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 AC007686.3-201ENST00000619017 3487 ntBASIC11.76□□□□□ -0.53
RNF183Q96D59 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RNF183Q96D59 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
RNF183Q96D59 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
RNF183Q96D59 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
RNF183Q96D59 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 KRT8P12-202ENST00000472924 1397 ntBASIC11.76□□□□□ -0.53
RNF183Q96D59 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.76□□□□□ -0.53
RNF183Q96D59 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.76□□□□□ -0.53
RNF183Q96D59 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RNF183Q96D59 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.76□□□□□ -0.53
RNF183Q96D59 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
RNF183Q96D59 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
RNF183Q96D59 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
RNF183Q96D59 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RNF183Q96D59 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RNF183Q96D59 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RNF183Q96D59 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
RNF183Q96D59 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC11.75□□□□□ -0.53
RNF183Q96D59 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms