Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.22■□□□□ 0.67
RPGRQ92834 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RPGRQ92834 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.21■□□□□ 0.67
RPGRQ92834 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RPGRQ92834 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 AC080080.1-201ENST00000625121 2420 ntBASIC19.21■□□□□ 0.67
RPGRQ92834 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.21■□□□□ 0.67
RPGRQ92834 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.21■□□□□ 0.67
RPGRQ92834 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.21■□□□□ 0.67
RPGRQ92834 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RPGRQ92834 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.21■□□□□ 0.67
RPGRQ92834 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.21■□□□□ 0.67
RPGRQ92834 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.21■□□□□ 0.67
RPGRQ92834 ACTG1P17-201ENST00000558391 1119 ntBASIC19.21■□□□□ 0.67
RPGRQ92834 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.21■□□□□ 0.67
RPGRQ92834 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.21■□□□□ 0.67
RPGRQ92834 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RPGRQ92834 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RPGRQ92834 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RPGRQ92834 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.21■□□□□ 0.67
RPGRQ92834 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RPGRQ92834 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.21■□□□□ 0.67
RPGRQ92834 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.21■□□□□ 0.66
RPGRQ92834 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPGRQ92834 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPGRQ92834 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RPGRQ92834 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.2■□□□□ 0.66
RPGRQ92834 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPGRQ92834 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RPGRQ92834 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPGRQ92834 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
RPGRQ92834 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPGRQ92834 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC19.2■□□□□ 0.66
RPGRQ92834 KRTAP10-13P-201ENST00000412914 571 ntBASIC19.2■□□□□ 0.66
RPGRQ92834 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.2■□□□□ 0.66
RPGRQ92834 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC19.2■□□□□ 0.66
RPGRQ92834 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.2■□□□□ 0.66
RPGRQ92834 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.2■□□□□ 0.66
RPGRQ92834 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.2■□□□□ 0.66
RPGRQ92834 AC091804.1-201ENST00000486888 567 ntBASIC19.2■□□□□ 0.66
RPGRQ92834 SCARNA20.5-201ENST00000516991 142 ntBASIC19.2■□□□□ 0.66
RPGRQ92834 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.2■□□□□ 0.66
RPGRQ92834 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.2■□□□□ 0.66
RPGRQ92834 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.2■□□□□ 0.66
RPGRQ92834 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.2■□□□□ 0.66
RPGRQ92834 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RPGRQ92834 AL096828.3-201ENST00000615354 462 ntBASIC19.2■□□□□ 0.66
RPGRQ92834 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.2■□□□□ 0.66
RPGRQ92834 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RPGRQ92834 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.2■□□□□ 0.66
RPGRQ92834 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPGRQ92834 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPGRQ92834 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPGRQ92834 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RPGRQ92834 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPGRQ92834 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPGRQ92834 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPGRQ92834 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.2■□□□□ 0.66
RPGRQ92834 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RPGRQ92834 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RPGRQ92834 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.2■□□□□ 0.66
RPGRQ92834 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RPGRQ92834 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPGRQ92834 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
RPGRQ92834 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.19■□□□□ 0.66
RPGRQ92834 AGGF1P2-201ENST00000426656 2106 ntBASIC19.19■□□□□ 0.66
RPGRQ92834 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPGRQ92834 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPGRQ92834 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC19.19■□□□□ 0.66
RPGRQ92834 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.19■□□□□ 0.66
RPGRQ92834 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPGRQ92834 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPGRQ92834 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPGRQ92834 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RPGRQ92834 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.19■□□□□ 0.66
RPGRQ92834 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms