Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.7■□□□□ 0.42
USP6NLQ92738 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
USP6NLQ92738 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6NLQ92738 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6NLQ92738 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6NLQ92738 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
USP6NLQ92738 MTX1P1-201ENST00000440904 838 ntBASIC17.7■□□□□ 0.42
USP6NLQ92738 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
USP6NLQ92738 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.7■□□□□ 0.42
USP6NLQ92738 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.7■□□□□ 0.42
USP6NLQ92738 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.7■□□□□ 0.42
USP6NLQ92738 AL096828.3-201ENST00000615354 462 ntBASIC17.7■□□□□ 0.42
USP6NLQ92738 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6NLQ92738 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6NLQ92738 AC018735.1-201ENST00000437208 1502 ntBASIC17.7■□□□□ 0.42
USP6NLQ92738 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
USP6NLQ92738 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6NLQ92738 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6NLQ92738 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
USP6NLQ92738 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.7■□□□□ 0.42
USP6NLQ92738 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
USP6NLQ92738 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.7■□□□□ 0.42
USP6NLQ92738 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
USP6NLQ92738 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.69■□□□□ 0.42
USP6NLQ92738 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
USP6NLQ92738 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.69■□□□□ 0.42
USP6NLQ92738 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.69■□□□□ 0.42
USP6NLQ92738 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.69■□□□□ 0.42
USP6NLQ92738 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.69■□□□□ 0.42
USP6NLQ92738 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
USP6NLQ92738 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.69■□□□□ 0.42
USP6NLQ92738 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.69■□□□□ 0.42
USP6NLQ92738 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.69■□□□□ 0.42
USP6NLQ92738 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
USP6NLQ92738 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.69■□□□□ 0.42
USP6NLQ92738 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.69■□□□□ 0.42
USP6NLQ92738 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
USP6NLQ92738 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
USP6NLQ92738 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.69■□□□□ 0.42
USP6NLQ92738 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
USP6NLQ92738 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.68■□□□□ 0.42
USP6NLQ92738 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
USP6NLQ92738 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
USP6NLQ92738 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
USP6NLQ92738 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.68■□□□□ 0.42
USP6NLQ92738 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.68■□□□□ 0.42
USP6NLQ92738 FNTAP2-201ENST00000430308 634 ntBASIC17.68■□□□□ 0.42
USP6NLQ92738 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.68■□□□□ 0.42
USP6NLQ92738 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.68■□□□□ 0.42
USP6NLQ92738 AC005077.2-201ENST00000449786 690 ntBASIC17.68■□□□□ 0.42
USP6NLQ92738 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.68■□□□□ 0.42
USP6NLQ92738 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.68■□□□□ 0.42
USP6NLQ92738 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.68■□□□□ 0.42
USP6NLQ92738 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.68■□□□□ 0.42
USP6NLQ92738 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.68■□□□□ 0.42
USP6NLQ92738 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.68■□□□□ 0.42
USP6NLQ92738 AC018695.7-201ENST00000624587 2492 ntBASIC17.68■□□□□ 0.42
USP6NLQ92738 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.68■□□□□ 0.42
USP6NLQ92738 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
USP6NLQ92738 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.68■□□□□ 0.42
USP6NLQ92738 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.68■□□□□ 0.42
USP6NLQ92738 ALOX12P2-203ENST00000570921 1945 ntBASIC17.68■□□□□ 0.42
USP6NLQ92738 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP6NLQ92738 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms