Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF3Q92576 AC018892.3-201ENST00000623986 2499 ntBASIC14.18□□□□□ -0.14
PHF3Q92576 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.18□□□□□ -0.14
PHF3Q92576 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PHF3Q92576 AL596257.1-201ENST00000641463 2694 ntBASIC14.18□□□□□ -0.14
PHF3Q92576 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF3Q92576 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF3Q92576 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF3Q92576 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHF3Q92576 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.18□□□□□ -0.14
PHF3Q92576 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.18□□□□□ -0.14
PHF3Q92576 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.18□□□□□ -0.14
PHF3Q92576 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.18□□□□□ -0.14
PHF3Q92576 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.18□□□□□ -0.14
PHF3Q92576 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.18□□□□□ -0.14
PHF3Q92576 BRI3BPP1-201ENST00000594224 787 ntBASIC14.18□□□□□ -0.14
PHF3Q92576 AL158212.4-201ENST00000624062 1286 ntBASIC14.18□□□□□ -0.14
PHF3Q92576 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF3Q92576 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHF3Q92576 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
PHF3Q92576 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF3Q92576 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF3Q92576 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PHF3Q92576 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.18□□□□□ -0.14
PHF3Q92576 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PHF3Q92576 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF3Q92576 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PHF3Q92576 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.18□□□□□ -0.14
PHF3Q92576 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PHF3Q92576 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF3Q92576 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.18□□□□□ -0.14
PHF3Q92576 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PHF3Q92576 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PHF3Q92576 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 KRT223P-202ENST00000449164 1292 ntBASIC14.17□□□□□ -0.14
PHF3Q92576 RN7SL399P-201ENST00000471648 279 ntBASIC14.17□□□□□ -0.14
PHF3Q92576 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.17□□□□□ -0.14
PHF3Q92576 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 AC036164.1-201ENST00000570544 333 ntBASIC14.17□□□□□ -0.14
PHF3Q92576 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.17□□□□□ -0.14
PHF3Q92576 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PHF3Q92576 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
PHF3Q92576 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
PHF3Q92576 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
PHF3Q92576 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PHF3Q92576 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 AC103702.1-201ENST00000548801 2630 ntBASIC14.17□□□□□ -0.14
PHF3Q92576 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.17□□□□□ -0.14
PHF3Q92576 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PHF3Q92576 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.17□□□□□ -0.14
PHF3Q92576 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PHF3Q92576 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.17□□□□□ -0.14
PHF3Q92576 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PHF3Q92576 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PHF3Q92576 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PHF3Q92576 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.16□□□□□ -0.14
PHF3Q92576 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.16□□□□□ -0.14
PHF3Q92576 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF3Q92576 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHF3Q92576 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF3Q92576 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.16□□□□□ -0.14
PHF3Q92576 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF3Q92576 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.16□□□□□ -0.14
PHF3Q92576 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF3Q92576 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PHF3Q92576 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.16□□□□□ -0.14
PHF3Q92576 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHF3Q92576 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PHF3Q92576 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PHF3Q92576 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms