Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.04■□□□□ 0.16
PTCD2Q8WV60 CICP13-201ENST00000422015 2789 ntBASIC16.04■□□□□ 0.16
PTCD2Q8WV60 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 AC087481.3-201ENST00000602886 1894 ntBASIC16.03■□□□□ 0.16
PTCD2Q8WV60 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.03■□□□□ 0.16
PTCD2Q8WV60 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 RPL37AP1-201ENST00000412502 279 ntBASIC16.03■□□□□ 0.16
PTCD2Q8WV60 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 AC122134.1-202ENST00000569111 1201 ntBASIC16.03■□□□□ 0.16
PTCD2Q8WV60 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 AC005014.3-201ENST00000605985 190 ntBASIC16.03■□□□□ 0.16
PTCD2Q8WV60 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTCD2Q8WV60 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 AC100757.3-201ENST00000622361 1406 ntBASIC16.02■□□□□ 0.16
PTCD2Q8WV60 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 MRPS18AP1-201ENST00000414458 589 ntBASIC16.02■□□□□ 0.16
PTCD2Q8WV60 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 BASP1P1-201ENST00000430708 665 ntBASIC16.02■□□□□ 0.16
PTCD2Q8WV60 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 AC092364.2-202ENST00000597012 1073 ntBASIC16.02■□□□□ 0.16
PTCD2Q8WV60 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTCD2Q8WV60 AL590560.3-201ENST00000623350 461 ntBASIC16.02■□□□□ 0.16
PTCD2Q8WV60 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.02■□□□□ 0.15
PTCD2Q8WV60 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PTCD2Q8WV60 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.02■□□□□ 0.15
PTCD2Q8WV60 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTCD2Q8WV60 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.02■□□□□ 0.15
PTCD2Q8WV60 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.02■□□□□ 0.15
PTCD2Q8WV60 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTCD2Q8WV60 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PTCD2Q8WV60 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
PTCD2Q8WV60 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTCD2Q8WV60 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTCD2Q8WV60 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PTCD2Q8WV60 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTCD2Q8WV60 PPT1-215ENST00000641471 2368 ntBASIC16.01■□□□□ 0.15
PTCD2Q8WV60 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms