Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 TNRC18P2-201ENST00000417666 2714 ntBASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SMARCC2Q8TAQ2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 AC236430.1-201ENST00000402231 743 ntBASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 MRPS18AP1-201ENST00000414458 589 ntBASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMARCC2Q8TAQ2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 AC009477.1-201ENST00000452936 217 ntBASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 AL512361.1-201ENST00000554200 418 ntBASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SMARCC2Q8TAQ2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SMARCC2Q8TAQ2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMARCC2Q8TAQ2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.39■□□□□ 0.54
SMARCC2Q8TAQ2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMARCC2Q8TAQ2 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 FER1L4-210ENST00000615531 5998 ntBASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMARCC2Q8TAQ2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms