Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AL157791.1-201ENST00000553667 1699 ntBASIC21.27■■□□□ 1
XRN1Q8IZH2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.27■■□□□ 1
XRN1Q8IZH2 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
XRN1Q8IZH2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 AC114501.1-201ENST00000445949 172 ntBASIC21.26■□□□□ 0.99
XRN1Q8IZH2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
XRN1Q8IZH2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 KRT18P66-201ENST00000452970 1269 ntBASIC21.25■□□□□ 0.99
XRN1Q8IZH2 STUB1-204ENST00000564370 875 ntTSL 2 BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 AC138894.2-201ENST00000602838 371 ntBASIC21.25■□□□□ 0.99
XRN1Q8IZH2 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC21.25■□□□□ 0.99
XRN1Q8IZH2 MIR6756-201ENST00000616240 63 ntBASIC21.25■□□□□ 0.99
XRN1Q8IZH2 Z98259.2-201ENST00000641583 609 ntBASIC21.25■□□□□ 0.99
XRN1Q8IZH2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 AC022211.2-201ENST00000585075 2527 ntBASIC21.25■□□□□ 0.99
XRN1Q8IZH2 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
XRN1Q8IZH2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 AC026316.1-201ENST00000398900 414 ntBASIC21.24■□□□□ 0.99
XRN1Q8IZH2 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 IGLV3-15-201ENST00000518356 244 ntBASIC21.24■□□□□ 0.99
XRN1Q8IZH2 WT1-AS_6.1-201ENST00000614919 121 ntBASIC21.24■□□□□ 0.99
XRN1Q8IZH2 AL136301.1-201ENST00000615830 422 ntBASIC21.24■□□□□ 0.99
XRN1Q8IZH2 AL136295.7-201ENST00000619226 1200 ntBASIC21.24■□□□□ 0.99
XRN1Q8IZH2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 RN7SKP214-201ENST00000364208 315 ntBASIC21.24■□□□□ 0.99
XRN1Q8IZH2 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.24■□□□□ 0.99
XRN1Q8IZH2 AC051619.9-201ENST00000623237 597 ntBASIC21.24■□□□□ 0.99
XRN1Q8IZH2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
XRN1Q8IZH2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
XRN1Q8IZH2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
XRN1Q8IZH2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC21.23■□□□□ 0.99
XRN1Q8IZH2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
XRN1Q8IZH2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
XRN1Q8IZH2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
XRN1Q8IZH2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
XRN1Q8IZH2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
XRN1Q8IZH2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
XRN1Q8IZH2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms