Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 MIR661-201ENST00000384842 89 ntBASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 SLED1-202ENST00000512051 380 ntBASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 AC104794.3-201ENST00000566840 1248 ntBASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 AC004790.1-201ENST00000612686 536 ntBASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.55■□□□□ 0.24
SCUBE3Q8IX30 AC136621.1-201ENST00000624017 2304 ntBASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 AC020658.6-201ENST00000623564 1870 ntBASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 AC046158.3-201ENST00000624947 2558 ntBASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 GNAQP1-201ENST00000444815 1067 ntBASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 AC092337.1-201ENST00000568699 1129 ntBASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SCUBE3Q8IX30 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms